Difference between revisions of "TSS:Mm 101494.1"
From referenceTSS
| Line 2: | Line 2: | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=3250 | |distance_to_tss=3250 | ||
|end=31821311 | |end=31821311 | ||
| Line 13: | Line 13: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|nearest_ensembl=ENSMUSG00000085772 | |nearest_ensembl=ENSMUSG00000085772 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_102311 |
|nearest_refseq=NR_102310 | |nearest_refseq=NR_102310 | ||
|nearest_unigene=Mm.150222 | |nearest_unigene=Mm.150222 | ||
| Line 21: | Line 21: | ||
|start_of_center_position=31821297 | |start_of_center_position=31821297 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=45(TTCTTTATAAAG,-,0.00),47(CTTTATAAAGTA,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:41, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 31821297 |
|---|---|
| End of the center position in the TSS region: | 31821298 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 3250 |
|---|---|
| Nearest PromoterID: | NR_102311 |
| Entrez ID: | 414116 |
| Nearest Unigene: | Mm.150222 |
| Nearest Refseq: | NR_102310 |
| Nearest Ensembl: | ENSMUSG00000085772 |
| Gene Name: | D630024D03Rik |
| Gene Alias: | - |
| Gene Description: | RIKEN cDNA D630024D03 gene |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 45(TTCTTTATAAAG,-,0.00),47(CTTTATAAAGTA,+,0.00) |
