Difference between revisions of "TSS:Mm 101538.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000102815.9 | + | |all_trans=ENSMUST00000102815.9:0 NR_110973:0 NM_023146:0 NM_001362875:0 AK016583:93 ENSMUST00000129179.7:95 AK035897:95 BC033503:97 ENSMUST00000037522.13:107 AK046865:107 AJ271458:111 BC148412:118 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-1 |
|end=33513771 | |end=33513771 | ||
|end_of_center_position=33513754 | |end_of_center_position=33513754 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=MGI:1929706 | |hgnc_mgi_id=MGI:1929706 | ||
|nearest_ensembl=ENSMUSG00000040594 | |nearest_ensembl=ENSMUSG00000040594 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001362875 |
|nearest_refseq=NM_023146 | |nearest_refseq=NM_023146 | ||
|nearest_unigene=Mm.383775 | |nearest_unigene=Mm.383775 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=mouse | |species=mouse | ||
|start=33513736 | |start=33513736 | ||
|start_of_center_position=33513753 | |start_of_center_position=33513753 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000102815.9 NM_023146 | + | |transcript_name=ENSMUST00000102815.9 NR_110973 NM_023146 NM_001362875 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101538.1 | |tss_id=mm_101538.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q99NF8 |
}} | }} | ||
Revision as of 16:42, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 33513753 |
|---|---|
| End of the center position in the TSS region: | 33513754 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000102815.9 NR_110973 NM_023146 NM_001362875 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | ENSMUST00000102815.9:0 NR_110973:0 NM_023146:0 NM_001362875:0 AK016583:93 ENSMUST00000129179.7:95 AK035897:95 BC033503:97 ENSMUST00000037522.13:107 AK046865:107 AJ271458:111 BC148412:118 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_001362875 |
| Entrez ID: | 66011 |
| Nearest Unigene: | Mm.383775 |
| Nearest Refseq: | NM_023146 |
| Nearest Ensembl: | ENSMUSG00000040594 |
| Gene Name: | RAN binding protein 17 |
| Gene Alias: | - |
| Gene Description: | RAN binding protein 17 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
