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Difference between revisions of "TSS:Mm 101562.1"

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Line 5: Line 5:
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.005
 
|cpg_percent=0.005
|distance=
+
|distance=NA
|distance_to_tss=27899
+
|distance_to_tss=23454
 
|end=34075122
 
|end=34075122
 
|end_of_center_position=34075100
 
|end_of_center_position=34075100
|entrez_id=16822
+
|entrez_id=76874
 
|gc_percent=0.462687
 
|gc_percent=0.462687
|gene_alias=AI323664
+
|gene_alias=-
|gene_description=lymphocyte cytosolic protein 2
+
|gene_description=RIKEN cDNA 4930469K13 gene
|gene_name=Lcp2
+
|gene_name=4930469K13Rik
|gene_type=protein-coding
+
|gene_type=ncRNA
 
|m1Khoe=
 
|m1Khoe=
|nearest_ensembl=ENSMUSG00000002699
+
|nearest_ensembl=
|nearest_promoter_id=NM_010696
+
|nearest_promoter_id=NR_155520
|nearest_refseq=NM_010696
+
|nearest_refseq=NR_155520
|nearest_unigene=Mm.265350
+
|nearest_unigene=Mm.437529
 
|num_trans=0
 
|num_trans=0
 
|species=mouse
 
|species=mouse

Latest revision as of 16:43, 19 June 2021

Basic information about the TSS


TSS ID:mm_101562.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:34075077
End:34075122
Strand:-
TSS Score:1
Start of the center position in the TSS region:34075099
End of the center position in the TSS region:34075100



Gene and protein annotation


Transcript_name:
Distance:NA
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Gene_name:4930469K13Rik
Gene_symbol:
Gene_synonyms:
Gene_source:



Transcript annotation


Transcript_name:
Distance:NA
Num_trans:0
All_trans:



TATA-Box annotation


Distance to TSS:23454
Nearest PromoterID:NR_155520
Entrez ID:76874
Nearest Unigene:Mm.437529
Nearest Refseq:NR_155520
Nearest Ensembl:
Gene Name:4930469K13Rik
Gene Alias:-
Gene Description:RIKEN cDNA 4930469K13 gene
Gene Type:ncRNA
CpG%:0.005
GC%:0.462687
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):