Difference between revisions of "TSS:Mm 101642.1"
From referenceTSS
| Line 5: | Line 5: | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss=- | + | |distance_to_tss=-452582 |
|end=36433114 | |end=36433114 | ||
|end_of_center_position=36433109 | |end_of_center_position=36433109 | ||
|entrez_id=211652 | |entrez_id=211652 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=AA408228 | + | |gene_alias=AA408228{{!}}AU017197{{!}}BC037006{{!}}Kibra |
| − | |gene_description= | + | |gene_description=WW, C2 and coiled-coil domain containing 1 |
|gene_name=Wwc1 | |gene_name=Wwc1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 25: | Line 25: | ||
|start_of_center_position=36433108 | |start_of_center_position=36433108 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=69(CCTTTAAAATCC,+,0.00),79(CCTTTTATGGAG,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:45, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 36433108 |
|---|---|
| End of the center position in the TSS region: | 36433109 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -452582 |
|---|---|
| Nearest PromoterID: | NM_170779 |
| Entrez ID: | 211652 |
| Nearest Unigene: | Mm.31267 |
| Nearest Refseq: | NM_170779 |
| Nearest Ensembl: | ENSMUSG00000018849 |
| Gene Name: | Wwc1 |
| Gene Alias: | AA408228|AU017197|BC037006|Kibra |
| Gene Description: | WW, C2 and coiled-coil domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 69(CCTTTAAAATCC,+,0.00),79(CCTTTTATGGAG,+,0.00) |
