Difference between revisions of "TSS:Mm 10167.1"
From referenceTSS
| Line 8: | Line 8: | ||
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=30996 | |distance_to_tss=30996 | ||
|end=4431997 | |end=4431997 | ||
| Line 14: | Line 14: | ||
|entrez_id=209630 | |entrez_id=209630 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
| − | |gene_alias=2700017I06Rik | + | |gene_alias=2700017I06Rik{{!}}5330420J21{{!}}AI594879{{!}}C230040M21Rik{{!}}Frmd4{{!}}Gm13190{{!}}mKIAA1294 |
|gene_description=FERM domain containing 4A | |gene_description=FERM domain containing 4A | ||
|gene_name=Frmd4a | |gene_name=Frmd4a | ||
| Line 28: | Line 28: | ||
|start_of_center_position=4431971 | |start_of_center_position=4431971 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=35(CCTTTTATGACA,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:46, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 4431971 |
|---|---|
| End of the center position in the TSS region: | 4431972 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 30996 |
|---|---|
| Nearest PromoterID: | NM_001177843 |
| Entrez ID: | 209630 |
| Nearest Unigene: | Mm.37932 |
| Nearest Refseq: | NM_172475 |
| Nearest Ensembl: | ENSMUSG00000026657 |
| Gene Name: | Frmd4a |
| Gene Alias: | 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 |
| Gene Description: | FERM domain containing 4A |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 35(CCTTTTATGACA,+,0.00) |
