Difference between revisions of "TSS:Mm 101777.1"
From referenceTSS
| Line 2: | Line 2: | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=166524 | |distance_to_tss=166524 | ||
|end=44950408 | |end=44950408 | ||
| Line 8: | Line 8: | ||
|entrez_id=100504255 | |entrez_id=100504255 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| − | |gene_alias= | + | |gene_alias=- |
|gene_description=predicted gene 12159 | |gene_description=predicted gene 12159 | ||
|gene_name=Gm12159 | |gene_name=Gm12159 | ||
| Line 21: | Line 21: | ||
|start_of_center_position=44950404 | |start_of_center_position=44950404 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=36(CCTTTTCTGGAG,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:48, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 44950404 |
|---|---|
| End of the center position in the TSS region: | 44950405 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 166524 |
|---|---|
| Nearest PromoterID: | NR_045100 |
| Entrez ID: | 100504255 |
| Nearest Unigene: | Mm.123608 |
| Nearest Refseq: | NR_045100 |
| Nearest Ensembl: | ENSMUSG00000084773 |
| Gene Name: | Gm12159 |
| Gene Alias: | - |
| Gene Description: | predicted gene 12159 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 36(CCTTTTCTGGAG,+,0.00) |
