Difference between revisions of "TSS:Mm 105469.1"
From referenceTSS
| Line 12: | Line 12: | ||
|entrez_id=632687 | |entrez_id=632687 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
| − | |gene_alias=4933417C16Rik | + | |gene_alias=4933417C16Rik{{!}}AV039223{{!}}Rnf190 |
|gene_description=membrane-associated ring finger (C3HC4) 10 | |gene_description=membrane-associated ring finger (C3HC4) 10 | ||
|gene_id=632687 | |gene_id=632687 | ||
| − | |gene_name=membrane | + | |gene_name=membrane associated ring-CH-type finger 10 |
|gene_source=MGI:2443469 | |gene_source=MGI:2443469 | ||
| − | |gene_symbol= | + | |gene_symbol=Marchf10 |
| − | |gene_synonyms=4933417C16Rik OTTMUSG00000002847 Rnf190 | + | |gene_synonyms=4933417C16Rik March10 OTTMUSG00000002847 Rnf190 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:2443469 | |hgnc_mgi_id=MGI:2443469 | ||
|nearest_ensembl=ENSMUSG00000078627 | |nearest_ensembl=ENSMUSG00000078627 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001039242 |
|nearest_refseq=NM_172568 | |nearest_refseq=NM_172568 | ||
|nearest_unigene=Mm.121570 | |nearest_unigene=Mm.121570 | ||
Revision as of 18:15, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 105455312 |
|---|---|
| End of the center position in the TSS region: | 105455313 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000138977.7 |
|---|---|
| Distance: | 6 |
| Num_trans: | 1 |
| All_trans: | ENSMUST00000138977.7:6 |
TATA-Box annotation
| Distance to TSS: | 1423 |
|---|---|
| Nearest PromoterID: | NM_001039242 |
| Entrez ID: | 632687 |
| Nearest Unigene: | Mm.121570 |
| Nearest Refseq: | NM_172568 |
| Nearest Ensembl: | ENSMUSG00000078627 |
| Gene Name: | membrane associated ring-CH-type finger 10 |
| Gene Alias: | 4933417C16Rik|AV039223|Rnf190 |
| Gene Description: | membrane-associated ring finger (C3HC4) 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
