Difference between revisions of "TSS:Mm 121389.1"
From referenceTSS
| Line 4: | Line 4: | ||
|Dnajc3b= | |Dnajc3b= | ||
|Prkri= | |Prkri= | ||
| − | |all_trans=AK202590:-437 | + | |all_trans=LF242722:-433 MA478299:-433 AK202590:-437 |
|chr=chr14 | |chr=chr14 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance=- | + | |distance=-433 |
|distance_to_tss=44008 | |distance_to_tss=44008 | ||
|end=118981947 | |end=118981947 | ||
| Line 13: | Line 13: | ||
|entrez_id=100037258 | |entrez_id=100037258 | ||
|gc_percent=0.383085 | |gc_percent=0.383085 | ||
| − | |gene_alias=AA408985 | + | |gene_alias=AA408985{{!}}AU067833{{!}}Dnajc3a{{!}}Dnajc3b{{!}}Prkri{{!}}mp58{{!}}p58{{!}}p58IPK |
|gene_description=DnaJ heat shock protein family (Hsp40) member C3 | |gene_description=DnaJ heat shock protein family (Hsp40) member C3 | ||
|gene_id=100037258 | |gene_id=100037258 | ||
| − | |gene_name= | + | |gene_name=Dnajc3 |
|gene_source=MGI:107373 | |gene_source=MGI:107373 | ||
|gene_symbol=Dnajc3 | |gene_symbol=Dnajc3 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_008929 | |nearest_refseq=NM_008929 | ||
|nearest_unigene=Mm.12616 | |nearest_unigene=Mm.12616 | ||
| − | |num_trans= | + | |num_trans=3 |
|p58= | |p58= | ||
|p58IPK= | |p58IPK= | ||
| Line 34: | Line 34: | ||
|start_of_center_position=118981940 | |start_of_center_position=118981940 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF242722 MA478299 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_121389.1 | |tss_id=mm_121389.1 | ||
Latest revision as of 00:26, 20 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 118981940 |
|---|---|
| End of the center position in the TSS region: | 118981941 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF242722 MA478299 |
|---|---|
| Distance: | -433 |
| Num_trans: | 3 |
| All_trans: | LF242722:-433 MA478299:-433 AK202590:-437 |
TATA-Box annotation
| Distance to TSS: | 44008 |
|---|---|
| Nearest PromoterID: | NM_008929 |
| Entrez ID: | 100037258 |
| Nearest Unigene: | Mm.12616 |
| Nearest Refseq: | NM_008929 |
| Nearest Ensembl: | ENSMUSG00000022136 |
| Gene Name: | Dnajc3 |
| Gene Alias: | AA408985|AU067833|Dnajc3a|Dnajc3b|Prkri|mp58|p58|p58IPK |
| Gene Description: | DnaJ heat shock protein family (Hsp40) member C3 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.383085 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
