Difference between revisions of "TSS:Mm 125521.1"
From referenceTSS
| Line 2: | Line 2: | ||
|Afr1= | |Afr1= | ||
|Raf= | |Raf= | ||
| − | |all_trans=BC059178:-2 AK031782:-144 AK157631:-234 NM_199449 | + | |all_trans=BC059178:-2 AK031782:-144 AK157631:-234 NM_199449:-248 ENSMUST00000096430.10:-250 |
|chr=chr15 | |chr=chr15 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| Line 11: | Line 11: | ||
|entrez_id=387609 | |entrez_id=387609 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| − | |gene_alias=Afr-1 | + | |gene_alias=Afr-1{{!}}Afr1{{!}}Raf{{!}}mKIAA0854 |
|gene_description=zinc fingers and homeoboxes 2 | |gene_description=zinc fingers and homeoboxes 2 | ||
|gene_id=387609 | |gene_id=387609 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_199449 | |nearest_refseq=NM_199449 | ||
|nearest_unigene=Mm.36557 | |nearest_unigene=Mm.36557 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=mouse | |species=mouse | ||
|start=57694914 | |start=57694914 | ||
Revision as of 02:04, 20 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 57694946 |
|---|---|
| End of the center position in the TSS region: | 57694947 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC059178 |
|---|---|
| Distance: | -2 |
| Num_trans: | 5 |
| All_trans: | BC059178:-2 AK031782:-144 AK157631:-234 NM_199449:-248 ENSMUST00000096430.10:-250 |
TATA-Box annotation
| Distance to TSS: | 280 |
|---|---|
| Nearest PromoterID: | NM_199449 |
| Entrez ID: | 387609 |
| Nearest Unigene: | Mm.36557 |
| Nearest Refseq: | NM_199449 |
| Nearest Ensembl: | ENSMUSG00000071757 |
| Gene Name: | zinc fingers and homeoboxes 2 |
| Gene Alias: | Afr-1|Afr1|Raf|mKIAA0854 |
| Gene Description: | zinc fingers and homeoboxes 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
