Difference between revisions of "TSS:Mm 130083.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENSMUST00000227834.1:8 AK008010:8 ENSMUST00000228005.1:-46 BC037508:54 ENSMUST00000227854.1:-60 ENSMUST00000226267.1:71 ENSMUST00000049968.8:-311 NM_001013022:-311 BC087962:-311 ENSMUST00000228111.1:-339 |
|chr=chr15 | |chr=chr15 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001013022 | |nearest_refseq=NM_001013022 | ||
|nearest_unigene=Mm.247273 | |nearest_unigene=Mm.247273 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=mouse | |species=mouse | ||
|start=89378932 | |start=89378932 | ||
|start_of_center_position=89378937 | |start_of_center_position=89378937 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENSMUST00000227834.1 AK008010 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_130083.1 | |tss_id=mm_130083.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A2I3BQN6 |
}} | }} | ||
Revision as of 03:52, 20 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 89378937 |
|---|---|
| End of the center position in the TSS region: | 89378938 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000227834.1 AK008010 |
|---|---|
| Distance: | 8 |
| Num_trans: | 10 |
| All_trans: | ENSMUST00000227834.1:8 AK008010:8 ENSMUST00000228005.1:-46 BC037508:54 ENSMUST00000227854.1:-60 ENSMUST00000226267.1:71 ENSMUST00000049968.8:-311 NM_001013022:-311 BC087962:-311 ENSMUST00000228111.1:-339 |
TATA-Box annotation
| Distance to TSS: | 316 |
|---|---|
| Nearest PromoterID: | NM_001013022 |
| Entrez ID: | 70113 |
| Nearest Unigene: | Mm.247273 |
| Nearest Refseq: | NM_001013022 |
| Nearest Ensembl: | ENSMUSG00000047394 |
| Gene Name: | outer dense fiber of sperm tails 3B |
| Gene Alias: | 2010001J22Rik |
| Gene Description: | outer dense fiber of sperm tails 3B |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
