Difference between revisions of "TSS:Mm 135307.1"
From referenceTSS
| Line 3: | Line 3: | ||
|Cdgap= | |Cdgap= | ||
|D330026I07Rik= | |D330026I07Rik= | ||
| − | |all_trans=ENSMUST00000124866.1:0 ENSMUST00000132697.1:0 AK149975:0 AK150109:0 AK018057:0 AK045213:0 AK155729:8 AK170685:10 BC138870:23 NM_020260 | + | |all_trans=ENSMUST00000124866.1:0 ENSMUST00000132697.1:0 AK149975:0 AK150109:0 AK018057:0 AK045213:0 AK155729:8 AK170685:10 BC138870:23 NM_020260:-132 AF151363:187 AK164669:310 AK136348:-352 ENSMUST00000023487.4:-371 AK138417:-371 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| Line 12: | Line 12: | ||
|entrez_id=12549 | |entrez_id=12549 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
| − | |gene_alias=5830477L08Rik | + | |gene_alias=5830477L08Rik{{!}}AU041750{{!}}Cdgap{{!}}D330026I07Rik |
|gene_description=Rho GTPase activating protein 31 | |gene_description=Rho GTPase activating protein 31 | ||
|gene_id=12549 | |gene_id=12549 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_020260 | |nearest_refseq=NM_020260 | ||
|nearest_unigene=Mm.370848 | |nearest_unigene=Mm.370848 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=mouse | |species=mouse | ||
|start=38712862 | |start=38712862 | ||
Revision as of 05:55, 20 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 38712882 |
|---|---|
| End of the center position in the TSS region: | 38712883 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000124866.1 ENSMUST00000132697.1 AK149975 AK150109 AK018057 AK045213 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | ENSMUST00000124866.1:0 ENSMUST00000132697.1:0 AK149975:0 AK150109:0 AK018057:0 AK045213:0 AK155729:8 AK170685:10 BC138870:23 NM_020260:-132 AF151363:187 AK164669:310 AK136348:-352 ENSMUST00000023487.4:-371 AK138417:-371 |
TATA-Box annotation
| Distance to TSS: | 152 |
|---|---|
| Nearest PromoterID: | NM_020260 |
| Entrez ID: | 12549 |
| Nearest Unigene: | Mm.370848 |
| Nearest Refseq: | NM_020260 |
| Nearest Ensembl: | ENSMUSG00000022799 |
| Gene Name: | Rho GTPase activating protein 31 |
| Gene Alias: | 5830477L08Rik|AU041750|Cdgap|D330026I07Rik |
| Gene Description: | Rho GTPase activating protein 31 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
