Difference between revisions of "TSS:Mm 146757.1"
From referenceTSS
| Line 2: | Line 2: | ||
|N-CAD= | |N-CAD= | ||
|Ncad= | |Ncad= | ||
| − | |all_trans=AK032826:63 BC022107:83 ENSMUST00000152779.1:89 AK087418:89 AB008811:-169 M31131:-169 | + | |all_trans=AK032826:63 BC022107:83 ENSMUST00000152779.1:89 AK087418:89 AB008811:-169 M31131:-169 |
|chr=chr18 | |chr=chr18 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 11: | Line 11: | ||
|entrez_id=12558 | |entrez_id=12558 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=CDHN | + | |gene_alias=CDHN{{!}}N-CAD{{!}}Ncad |
|gene_description=cadherin 2 | |gene_description=cadherin 2 | ||
|gene_id=12558 | |gene_id=12558 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_007664 | |nearest_refseq=NM_007664 | ||
|nearest_unigene=Mm.257437 | |nearest_unigene=Mm.257437 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=mouse | |species=mouse | ||
|start=16808550 | |start=16808550 | ||
Revision as of 10:20, 20 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 16808555 |
|---|---|
| End of the center position in the TSS region: | 16808556 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK032826 |
|---|---|
| Distance: | 63 |
| Num_trans: | 6 |
| All_trans: | AK032826:63 BC022107:83 ENSMUST00000152779.1:89 AK087418:89 AB008811:-169 M31131:-169 |
TATA-Box annotation
| Distance to TSS: | 690 |
|---|---|
| Nearest PromoterID: | NM_007664 |
| Entrez ID: | 12558 |
| Nearest Unigene: | Mm.257437 |
| Nearest Refseq: | NM_007664 |
| Nearest Ensembl: | ENSMUSG00000024304 |
| Gene Name: | cadherin 2 |
| Gene Alias: | CDHN|N-CAD|Ncad |
| Gene Description: | cadherin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
