Difference between revisions of "TSS:Mm 148760.1"
From referenceTSS
| Line 3: | Line 3: | ||
|ORF6= | |ORF6= | ||
|Znhit2-ps= | |Znhit2-ps= | ||
| − | |all_trans=BC019440:-118 AK164029:-125 NM_013859 | + | |all_trans=BC019440:-118 AK164029:-125 NM_013859:-132 AK086863:-132 AF119498:-142 ENSMUST00000162726.4:-147 BC092256:-147 |
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| Line 12: | Line 12: | ||
|entrez_id=29805 | |entrez_id=29805 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=C11orf5 | + | |gene_alias=C11orf5{{!}}Fon{{!}}ORF6{{!}}Znhit2-ps |
| − | |gene_description= | + | |gene_description=zinc finger, HIT domain containing 2 |
|gene_id=29805 | |gene_id=29805 | ||
| − | |gene_name= | + | |gene_name=zinc finger, HIT domain containing 2 |
|gene_source=MGI:1352481 | |gene_source=MGI:1352481 | ||
|gene_symbol=Znhit2 | |gene_symbol=Znhit2 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_013859 | |nearest_refseq=NM_013859 | ||
|nearest_unigene=Mm.2310 | |nearest_unigene=Mm.2310 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=mouse | |species=mouse | ||
|start=6061338 | |start=6061338 | ||
Revision as of 11:07, 20 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6061357 |
|---|---|
| End of the center position in the TSS region: | 6061358 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC019440 |
|---|---|
| Distance: | -118 |
| Num_trans: | 7 |
| All_trans: | BC019440:-118 AK164029:-125 NM_013859:-132 AK086863:-132 AF119498:-142 ENSMUST00000162726.4:-147 BC092256:-147 |
TATA-Box annotation
| Distance to TSS: | 151 |
|---|---|
| Nearest PromoterID: | NM_013859 |
| Entrez ID: | 29805 |
| Nearest Unigene: | Mm.2310 |
| Nearest Refseq: | NM_013859 |
| Nearest Ensembl: | ENSMUSG00000075227 |
| Gene Name: | zinc finger, HIT domain containing 2 |
| Gene Alias: | C11orf5|Fon|ORF6|Znhit2-ps |
| Gene Description: | zinc finger, HIT domain containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
