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Difference between revisions of "TSS:Mm 154312.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000082388.1:0 uc009vev.1:206.5 AK140219:206.5 AK153841:206.5 AK142736:206.5 AK140265:380.5
+
|all_trans=ENSMUST00000082388.1:0 AK140219:206.5 AK153841:206.5 AK142736:206.5 AK140265:380.5
 
|chr=chrM
 
|chr=chrM
 
|cpg_percent=NA
 
|cpg_percent=NA
Line 7: Line 7:
 
|end=79
 
|end=79
 
|end_of_center_position=73
 
|end_of_center_position=73
|entrez_id=
+
|entrez_id=NA
 
|gc_percent=NA
 
|gc_percent=NA
 
|gene_alias=
 
|gene_alias=
Line 22: Line 22:
 
|nearest_refseq=
 
|nearest_refseq=
 
|nearest_unigene=
 
|nearest_unigene=
|num_trans=6
+
|num_trans=5
 
|species=mouse
 
|species=mouse
 
|start=66
 
|start=66

Revision as of 13:16, 20 June 2021

Basic information about the TSS


TSS ID:mm_154312.1
Species:mouse
Chr:chrM
TSS Classification:yes
Start:66
End:79
Strand:+
TSS Score:1
Start of the center position in the TSS region:72
End of the center position in the TSS region:73



Gene and protein annotation


Transcript_name:ENSMUST00000082388.1
Distance:0
GeneID:
HGNC/MGI_ID:MGI:102493
UniProt_ID:
Gene_name:mitochondrially encoded 12S rRNA
Gene_symbol:mt-Rnr1
Gene_synonyms:12S_rRNA 12S_ribosomal_RNA 12SrRNA Rnr1_s-rRNA
Gene_source:MGI:102493



Transcript annotation


Transcript_name:ENSMUST00000082388.1
Distance:0
Num_trans:5
All_trans:ENSMUST00000082388.1:0 AK140219:206.5 AK153841:206.5 AK142736:206.5 AK140265:380.5



TATA-Box annotation


Distance to TSS:NA
Nearest PromoterID:NA
Entrez ID:NA
Nearest Unigene:
Nearest Refseq:
Nearest Ensembl:
Gene Name:mitochondrially encoded 12S rRNA
Gene Alias:
Gene Description:
Gene Type:
CpG%:NA
GC%:NA
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):







"NA" is not a number. "NA" is not a number.