Difference between revisions of "TSS:Mm 160975.1"
From referenceTSS
| Line 10: | Line 10: | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=-33 | |distance=-33 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1473 |
|end=101011871 | |end=101011871 | ||
|end_of_center_position=101011871 | |end_of_center_position=101011871 | ||
|entrez_id=11975 | |entrez_id=11975 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| − | |gene_alias=AA959968 | + | |gene_alias=AA959968{{!}}ATP6a1{{!}}Atp6n1{{!}}Atp6n1a{{!}}Atpv0a1{{!}}Vpp-1{{!}}Vpp1 |
| − | |gene_description= | + | |gene_description=ATPase, H+ transporting, lysosomal V0 subunit A1 |
|gene_id=11975 | |gene_id=11975 | ||
| − | |gene_name= | + | |gene_name=ATPase, H+ transporting, lysosomal V0 subunit A1 |
|gene_source=MGI:103286 | |gene_source=MGI:103286 | ||
|gene_symbol=Atp6v0a1 | |gene_symbol=Atp6v0a1 | ||
| Line 25: | Line 25: | ||
|hgnc_mgi_id=MGI:103286 | |hgnc_mgi_id=MGI:103286 | ||
|nearest_ensembl=ENSMUSG00000019302 | |nearest_ensembl=ENSMUSG00000019302 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001362638 |
|nearest_refseq=NM_016920 | |nearest_refseq=NM_016920 | ||
|nearest_unigene=Mm.340818 | |nearest_unigene=Mm.340818 | ||
Revision as of 15:49, 20 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 101011870 |
|---|---|
| End of the center position in the TSS region: | 101011871 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK204666 |
|---|---|
| Distance: | -33 |
| Num_trans: | 12 |
| All_trans: | AK204666:-33 AK192836:-35 AK195947:-35 AK198173:-35 ENSMUST00000092663.3:-50 AF218250:-50 AF218251:-50 AB022321:-56 U13836:-68 AK215374:-116 AK214847:-116 AK045877:191 |
TATA-Box annotation
| Distance to TSS: | 1473 |
|---|---|
| Nearest PromoterID: | NM_001362638 |
| Entrez ID: | 11975 |
| Nearest Unigene: | Mm.340818 |
| Nearest Refseq: | NM_016920 |
| Nearest Ensembl: | ENSMUSG00000019302 |
| Gene Name: | ATPase, H+ transporting, lysosomal V0 subunit A1 |
| Gene Alias: | AA959968|ATP6a1|Atp6n1|Atp6n1a|Atpv0a1|Vpp-1|Vpp1 |
| Gene Description: | ATPase, H+ transporting, lysosomal V0 subunit A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
