Difference between revisions of "TSS:Mm 161392.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC158114:18 BC158117:18 BC157952:20 BC172098:20 | + | |all_trans=BC158114:18 BC158117:18 BC157952:20 BC172098:20 BC165991:93 ENSMUST00000068992.7:94 |
|chr=chr14 | |chr=chr14 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=18 | |distance=18 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1843 |
|end=93888826 | |end=93888826 | ||
|end_of_center_position=93888826 | |end_of_center_position=93888826 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=MGI:1306801 | |hgnc_mgi_id=MGI:1306801 | ||
|nearest_ensembl=ENSMUSG00000055421 | |nearest_ensembl=ENSMUSG00000055421 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001081377 |
|nearest_refseq=NM_001081377 | |nearest_refseq=NM_001081377 | ||
|nearest_unigene=Mm.37126 | |nearest_unigene=Mm.37126 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=mouse | |species=mouse | ||
|start=93888825 | |start=93888825 | ||
Revision as of 15:59, 20 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 93888825 |
|---|---|
| End of the center position in the TSS region: | 93888826 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC158114 BC158117 |
|---|---|
| Distance: | 18 |
| Num_trans: | 6 |
| All_trans: | BC158114:18 BC158117:18 BC157952:20 BC172098:20 BC165991:93 ENSMUST00000068992.7:94 |
TATA-Box annotation
| Distance to TSS: | 1843 |
|---|---|
| Nearest PromoterID: | NM_001081377 |
| Entrez ID: | 211712 |
| Nearest Unigene: | Mm.37126 |
| Nearest Refseq: | NM_001081377 |
| Nearest Ensembl: | ENSMUSG00000055421 |
| Gene Name: | protocadherin 9 |
| Gene Alias: | - |
| Gene Description: | protocadherin 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
