Difference between revisions of "TSS:Mm 161499.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
− | |all_trans=BC037508:-75 | + | |all_trans=ENSMUST00000226267.1:-58 BC037508:-75 ENSMUST00000227834.1:-121 AK008010:-121 ENSMUST00000228005.1:-185 ENSMUST00000227854.1:-199 ENSMUST00000049968.8:-450 NM_001013022:-450 BC087962:-450 ENSMUST00000228111.1:-478 |
|chr=chr15 | |chr=chr15 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
− | |distance=- | + | |distance=-58 |
|distance_to_tss=450 | |distance_to_tss=450 | ||
|end=89378804 | |end=89378804 | ||
Line 22: | Line 22: | ||
|nearest_refseq=NM_001013022 | |nearest_refseq=NM_001013022 | ||
|nearest_unigene=Mm.247273 | |nearest_unigene=Mm.247273 | ||
− | |num_trans= | + | |num_trans=10 |
|species=mouse | |species=mouse | ||
|start=89378803 | |start=89378803 | ||
|start_of_center_position=89378803 | |start_of_center_position=89378803 | ||
|strand=- | |strand=- | ||
− | |transcript_name= | + | |transcript_name=ENSMUST00000226267.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_161499.1 | |tss_id=mm_161499.1 |
Revision as of 16:01, 20 June 2021
Basic information about the TSS
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Start of the center position in the TSS region: | 89378803 |
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End of the center position in the TSS region: | 89378804 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | ENSMUST00000226267.1 |
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Distance: | -58 |
Num_trans: | 10 |
All_trans: | ENSMUST00000226267.1:-58 BC037508:-75 ENSMUST00000227834.1:-121 AK008010:-121 ENSMUST00000228005.1:-185 ENSMUST00000227854.1:-199 ENSMUST00000049968.8:-450 NM_001013022:-450 BC087962:-450 ENSMUST00000228111.1:-478 |
TATA-Box annotation
Distance to TSS: | 450 |
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Nearest PromoterID: | NM_001013022 |
Entrez ID: | 70113 |
Nearest Unigene: | Mm.247273 |
Nearest Refseq: | NM_001013022 |
Nearest Ensembl: | ENSMUSG00000047394 |
Gene Name: | outer dense fiber of sperm tails 3B |
Gene Alias: | 2010001J22Rik |
Gene Description: | outer dense fiber of sperm tails 3B |
Gene Type: | protein-coding |
CpG%: | 0.105 |
GC%: | 0.686567 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |