Difference between revisions of "TSS:Mm 19795.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|OTTMUSG00000015136= | |OTTMUSG00000015136= | ||
| − | |all_trans=ENSMUST00000146110.1:0 NR_033473:0 | + | |all_trans=ENSMUST00000146110.1:0 NR_033473:0 AK145809:0 LF262327:-10 MA497904:-10 LF193463:-58 MA429040:-58 |
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NR_033473 | |nearest_refseq=NR_033473 | ||
|nearest_unigene=Mm.365649 | |nearest_unigene=Mm.365649 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=mouse | |species=mouse | ||
|start=109913297 | |start=109913297 | ||
|start_of_center_position=109913310 | |start_of_center_position=109913310 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000146110.1 NR_033473 | + | |transcript_name=ENSMUST00000146110.1 NR_033473 AK145809 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_19795.1 | |tss_id=mm_19795.1 | ||
Revision as of 21:28, 20 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109913310 |
|---|---|
| End of the center position in the TSS region: | 109913311 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000146110.1 NR_033473 AK145809 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENSMUST00000146110.1:0 NR_033473:0 AK145809:0 LF262327:-10 MA497904:-10 LF193463:-58 MA429040:-58 |
TATA-Box annotation
| Distance to TSS: | 8 |
|---|---|
| Nearest PromoterID: | NR_033473 |
| Entrez ID: | 100038454 |
| Nearest Unigene: | Mm.365649 |
| Nearest Refseq: | NR_033473 |
| Nearest Ensembl: | ENSMUSG00000063751 |
| Gene Name: | pluripotency associated transcript 8 |
| Gene Alias: | Gm13939 |
| Gene Description: | pluripotency associated transcript 8 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
