Difference between revisions of "TSS:Mm 20144.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NM_001081975 | + | |all_trans=NM_001081975:0 AK088946:0 AK169029:0 AK018514:0 AK011317:0 ENSMUST00000056732.3:-30 |
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 9: | Line 9: | ||
|entrez_id=100034361 | |entrez_id=100034361 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
| − | |gene_alias= | + | |gene_alias=Mfap1a |
|gene_description=microfibrillar-associated protein 1B | |gene_description=microfibrillar-associated protein 1B | ||
|gene_id=100034361 | |gene_id=100034361 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001081975 | |nearest_refseq=NM_001081975 | ||
|nearest_unigene=Mm.270393 | |nearest_unigene=Mm.270393 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=mouse | |species=mouse | ||
|start=121473993 | |start=121473993 | ||
|start_of_center_position=121474015 | |start_of_center_position=121474015 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_001081975 | + | |transcript_name=NM_001081975 AK088946 AK169029 AK018514 AK011317 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_20144.1 | |tss_id=mm_20144.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=C0HKD9 |
}} | }} | ||
Revision as of 21:36, 20 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 121474015 |
|---|---|
| End of the center position in the TSS region: | 121474016 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001081975 AK088946 AK169029 AK018514 AK011317 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | NM_001081975:0 AK088946:0 AK169029:0 AK018514:0 AK011317:0 ENSMUST00000056732.3:-30 |
TATA-Box annotation
| Distance to TSS: | 8 |
|---|---|
| Nearest PromoterID: | NM_001081975 |
| Entrez ID: | 100034361 |
| Nearest Unigene: | Mm.270393 |
| Nearest Refseq: | NM_001081975 |
| Nearest Ensembl: | ENSMUSG00000048222 |
| Gene Name: | microfibrillar-associated protein 1B |
| Gene Alias: | Mfap1a |
| Gene Description: | microfibrillar-associated protein 1B |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
