Difference between revisions of "TSS:Mm 22696.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|AV209098= | |AV209098= | ||
| − | |all_trans=NM_029289 | + | |all_trans=NM_029289:0 AK005586:0 ENSMUST00000029080.4:-27 AM040460:210 |
|chr=chr3 | |chr=chr3 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 10: | Line 10: | ||
|entrez_id=75439 | |entrez_id=75439 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias=1700001F04Rik | + | |gene_alias=1700001F04Rik{{!}}AV209098 |
|gene_description=cysteine-rich perinuclear theca 12 | |gene_description=cysteine-rich perinuclear theca 12 | ||
|gene_id=75439 | |gene_id=75439 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_029289 | |nearest_refseq=NM_029289 | ||
|nearest_unigene=Mm.27023 | |nearest_unigene=Mm.27023 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=mouse | |species=mouse | ||
|start=17948436 | |start=17948436 | ||
|start_of_center_position=17948443 | |start_of_center_position=17948443 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_029289 | + | |transcript_name=NM_029289 AK005586 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_22696.1 | |tss_id=mm_22696.1 | ||
Revision as of 22:35, 20 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17948443 |
|---|---|
| End of the center position in the TSS region: | 17948444 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_029289 AK005586 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | NM_029289:0 AK005586:0 ENSMUST00000029080.4:-27 AM040460:210 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_029289 |
| Entrez ID: | 75439 |
| Nearest Unigene: | Mm.27023 |
| Nearest Refseq: | NM_029289 |
| Nearest Ensembl: | ENSMUSG00000027564 |
| Gene Name: | cysteine-rich perinuclear theca 12 |
| Gene Alias: | 1700001F04Rik|AV209098 |
| Gene Description: | cysteine-rich perinuclear theca 12 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
