Difference between revisions of "TSS:Mm 28105.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000077524.3:36 NM_011839 | + | |all_trans=ENSMUST00000077524.3:36 NM_011839:36 AK053645:36 BC058730:-61 BC046628:70 AK144373:-119 AF149877:294 ENSMUST00000191695.1:-301 AF126427:-301 |
|chr=chr3 | |chr=chr3 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description=mab-21-like 2 | + | |gene_description=mab-21-like 2 |
|gene_id=23937 | |gene_id=23937 | ||
| − | |gene_name=mab-21-like 2 | + | |gene_name=mab-21-like 2 |
|gene_source=MGI:1346022 | |gene_source=MGI:1346022 | ||
|gene_symbol=Mab21l2 | |gene_symbol=Mab21l2 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_011839 | |nearest_refseq=NM_011839 | ||
|nearest_unigene=Mm.389466 | |nearest_unigene=Mm.389466 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=mouse | |species=mouse | ||
|start=86548318 | |start=86548318 | ||
|start_of_center_position=86548323 | |start_of_center_position=86548323 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000077524.3 NM_011839 | + | |transcript_name=ENSMUST00000077524.3 NM_011839 AK053645 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_28105.1 | |tss_id=mm_28105.1 | ||
Revision as of 00:40, 21 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 86548323 |
|---|---|
| End of the center position in the TSS region: | 86548324 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000077524.3 NM_011839 AK053645 |
|---|---|
| Distance: | 36 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000077524.3:36 NM_011839:36 AK053645:36 BC058730:-61 BC046628:70 AK144373:-119 AF149877:294 ENSMUST00000191695.1:-301 AF126427:-301 |
TATA-Box annotation
| Distance to TSS: | -40 |
|---|---|
| Nearest PromoterID: | NM_011839 |
| Entrez ID: | 23937 |
| Nearest Unigene: | Mm.389466 |
| Nearest Refseq: | NM_011839 |
| Nearest Ensembl: | ENSMUSG00000057777 |
| Gene Name: | mab-21-like 2 |
| Gene Alias: | - |
| Gene Description: | mab-21-like 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
