Difference between revisions of "TSS:Mm 30751.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000137532.7:37 | + | |all_trans=ENSMUST00000137532.7:37 NM_001356579:37 |
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=37 | |distance=37 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-42 |
|end=14929871 | |end=14929871 | ||
|end_of_center_position=14929866 | |end_of_center_position=14929866 | ||
|entrez_id=100038514 | |entrez_id=100038514 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias= | + | |gene_alias=- |
|gene_description=predicted gene 11837 | |gene_description=predicted gene 11837 | ||
| − | |gene_id= | + | |gene_id=100038514 |
|gene_name=predicted gene 11837 | |gene_name=predicted gene 11837 | ||
|gene_source=MGI:3702175 | |gene_source=MGI:3702175 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=MGI:3702175 | |hgnc_mgi_id=MGI:3702175 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001356579 |
|nearest_refseq=NM_001243100 | |nearest_refseq=NM_001243100 | ||
|nearest_unigene=Mm.331495 | |nearest_unigene=Mm.331495 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=mouse | |species=mouse | ||
|start=14929860 | |start=14929860 | ||
|start_of_center_position=14929865 | |start_of_center_position=14929865 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000137532.7 | + | |transcript_name=ENSMUST00000137532.7 NM_001356579 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_30751.1 | |tss_id=mm_30751.1 | ||
Revision as of 01:42, 21 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 14929865 |
|---|---|
| End of the center position in the TSS region: | 14929866 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000137532.7 NM_001356579 |
|---|---|
| Distance: | 37 |
| Num_trans: | 2 |
| All_trans: | ENSMUST00000137532.7:37 NM_001356579:37 |
TATA-Box annotation
| Distance to TSS: | -42 |
|---|---|
| Nearest PromoterID: | NM_001356579 |
| Entrez ID: | 100038514 |
| Nearest Unigene: | Mm.331495 |
| Nearest Refseq: | NM_001243100 |
| Nearest Ensembl: | |
| Gene Name: | predicted gene 11837 |
| Gene Alias: | - |
| Gene Description: | predicted gene 11837 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
