Difference between revisions of "TSS:Mm 50224.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|R75157= | |R75157= | ||
| − | |all_trans=Y07711:0 AK205275:30 AK183092:-166 ENSMUST00000203849.1:-177 AK090110:-179 AK035743:-190 AK076491:-191 AK170571:-193 ENSMUST00000164375.3:-209 AK031415:-209 ENSMUST00000203626.1:-210 ENSMUST00000203290.2:-215 ENSMUST00000203401.2:-215 AK161709:-215 AK165290:-215 X99063:-378 ENSMUST00000070635.12:-379 BC054775:-379 ENSMUST00000203652.2 | + | |all_trans=Y07711:0 AK205275:30 AK183092:-166 ENSMUST00000203849.1:-177 AK090110:-179 AK035743:-190 AK076491:-191 AK170571:-193 ENSMUST00000164375.3:-209 AK031415:-209 ENSMUST00000203626.1:-210 ENSMUST00000203290.2:-215 ENSMUST00000203401.2:-215 AK161709:-215 AK165290:-215 X99063:-378 ENSMUST00000070635.12:-379 BC054775:-379 ENSMUST00000203652.2:-420 NM_001289619:-420 NM_001289618:-420 NM_001289617:-420 NM_011777:-420 AK147812:-420 ENSMUST00000203846.2:-468 |
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 10: | Line 10: | ||
|entrez_id=22793 | |entrez_id=22793 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=9530098H06Rik | + | |gene_alias=9530098H06Rik{{!}}R75157 |
|gene_description=zyxin | |gene_description=zyxin | ||
|gene_id=22793 | |gene_id=22793 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_011777 | |nearest_refseq=NM_011777 | ||
|nearest_unigene=Mm.282303 | |nearest_unigene=Mm.282303 | ||
| − | |num_trans= | + | |num_trans=25 |
|species=mouse | |species=mouse | ||
|start=42350247 | |start=42350247 | ||
Revision as of 09:12, 21 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 42350301 |
|---|---|
| End of the center position in the TSS region: | 42350302 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | Y07711 |
|---|---|
| Distance: | 0 |
| Num_trans: | 25 |
| All_trans: | Y07711:0 AK205275:30 AK183092:-166 ENSMUST00000203849.1:-177 AK090110:-179 AK035743:-190 AK076491:-191 AK170571:-193 ENSMUST00000164375.3:-209 AK031415:-209 ENSMUST00000203626.1:-210 ENSMUST00000203290.2:-215 ENSMUST00000203401.2:-215 AK161709:-215 AK165290:-215 X99063:-378 ENSMUST00000070635.12:-379 BC054775:-379 ENSMUST00000203652.2:-420 NM_001289619:-420 NM_001289618:-420 NM_001289617:-420 NM_011777:-420 AK147812:-420 ENSMUST00000203846.2:-468 |
TATA-Box annotation
| Distance to TSS: | 474 |
|---|---|
| Nearest PromoterID: | NM_001289619 |
| Entrez ID: | 22793 |
| Nearest Unigene: | Mm.282303 |
| Nearest Refseq: | NM_011777 |
| Nearest Ensembl: | ENSMUSG00000029860 |
| Gene Name: | zyxin |
| Gene Alias: | 9530098H06Rik|R75157 |
| Gene Description: | zyxin |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
