Difference between revisions of "TSS:Mm 61568.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK038478:0 AK015078:-1 ENSMUST00000197011.1:-7 ENSMUST00000035939.7 | + | |all_trans=AK038478:0 AK015078:-1 ENSMUST00000197011.1:-7 LF293609:47 MA529186:47 LF196387:-52 MA431964:-52 ENSMUST00000035939.7:-95 AK034273:-95 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=MGI:3696417 | |hgnc_mgi_id=MGI:3696417 | ||
|nearest_ensembl=ENSMUSG00000050382 | |nearest_ensembl=ENSMUSG00000050382 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001291222 |
|nearest_refseq=NM_010626 | |nearest_refseq=NM_010626 | ||
|nearest_unigene=Mm.101633 | |nearest_unigene=Mm.101633 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=mouse | |species=mouse | ||
|start=79710377 | |start=79710377 | ||
Revision as of 13:34, 21 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 79710391 |
|---|---|
| End of the center position in the TSS region: | 79710392 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK038478 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | AK038478:0 AK015078:-1 ENSMUST00000197011.1:-7 LF293609:47 MA529186:47 LF196387:-52 MA431964:-52 ENSMUST00000035939.7:-95 AK034273:-95 |
TATA-Box annotation
| Distance to TSS: | 3794 |
|---|---|
| Nearest PromoterID: | NM_001291222 |
| Entrez ID: | 16576 |
| Nearest Unigene: | Mm.101633 |
| Nearest Refseq: | NM_010626 |
| Nearest Ensembl: | ENSMUSG00000050382 |
| Gene Name: | RIKEN cDNA 9330171B17 gene |
| Gene Alias: | - |
| Gene Description: | kinesin family member 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
