Difference between revisions of "TSS:Mm 99243.1"
From referenceTSS
| Line 3: | Line 3: | ||
|E2DH= | |E2DH= | ||
|Hsd17ba= | |Hsd17ba= | ||
| − | |all_trans=AK143346:17 BC125657:-26 BC125659:-26 ENSMUST00000019445.5:-27 NM_010475 | + | |all_trans=AK143346:17 BC125657:-26 BC125659:-26 ENSMUST00000019445.5:-27 NM_010475:-27 X89627:-27 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| Line 12: | Line 12: | ||
|entrez_id=15485 | |entrez_id=15485 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| − | |gene_alias=17HSDB1 | + | |gene_alias=17HSDB1{{!}}17beta-HSD{{!}}E2DH{{!}}Hsd17ba |
|gene_description=hydroxysteroid (17-beta) dehydrogenase 1 | |gene_description=hydroxysteroid (17-beta) dehydrogenase 1 | ||
|gene_id=15485 | |gene_id=15485 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_010475 | |nearest_refseq=NM_010475 | ||
|nearest_unigene=Mm.188939 | |nearest_unigene=Mm.188939 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=mouse | |species=mouse | ||
|start=101078437 | |start=101078437 | ||
Revision as of 03:47, 22 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 101078441 |
|---|---|
| End of the center position in the TSS region: | 101078442 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK143346 |
|---|---|
| Distance: | 17 |
| Num_trans: | 6 |
| All_trans: | AK143346:17 BC125657:-26 BC125659:-26 ENSMUST00000019445.5:-27 NM_010475:-27 X89627:-27 |
TATA-Box annotation
| Distance to TSS: | 31 |
|---|---|
| Nearest PromoterID: | NM_010475 |
| Entrez ID: | 15485 |
| Nearest Unigene: | Mm.188939 |
| Nearest Refseq: | NM_010475 |
| Nearest Ensembl: | ENSMUSG00000019301 |
| Gene Name: | hydroxysteroid (17-beta) dehydrogenase 1 |
| Gene Alias: | 17HSDB1|17beta-HSD|E2DH|Hsd17ba |
| Gene Description: | hydroxysteroid (17-beta) dehydrogenase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
