Difference between revisions of "TSS:Mm 99248.1"
From referenceTSS
| Line 3: | Line 3: | ||
|Ppat= | |Ppat= | ||
|Ukr1= | |Ukr1= | ||
| − | |all_trans=BC064753:-21 AF521095:-33 AK166894:-67 ENSMUST00000107308.3 | + | |all_trans=BC064753:-21 AF521095:-33 AK166894:-67 ENSMUST00000107308.3:-73 AK159912:-73 ENSMUST00000151056.7:-80 AK159405:-81 AK170330:-82 AK004878:-92 ENSMUST00000001806.9:-133 NM_001305982:-133 NR_155015:-133 LF198886:-134 MA434463:-134 BC156119:301 BC157111:301 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| Line 12: | Line 12: | ||
|entrez_id=71743 | |entrez_id=71743 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=1300003G02Rik | + | |gene_alias=1300003G02Rik{{!}}Dpck{{!}}Ppat{{!}}Ukr1 |
|gene_description=Coenzyme A synthase | |gene_description=Coenzyme A synthase | ||
|gene_id=71743 | |gene_id=71743 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_027896 | |nearest_refseq=NM_027896 | ||
|nearest_unigene=Mm.182271 | |nearest_unigene=Mm.182271 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=mouse | |species=mouse | ||
|start=101082697 | |start=101082697 | ||
Revision as of 03:47, 22 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 101082702 |
|---|---|
| End of the center position in the TSS region: | 101082703 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC064753 |
|---|---|
| Distance: | -21 |
| Num_trans: | 16 |
| All_trans: | BC064753:-21 AF521095:-33 AK166894:-67 ENSMUST00000107308.3:-73 AK159912:-73 ENSMUST00000151056.7:-80 AK159405:-81 AK170330:-82 AK004878:-92 ENSMUST00000001806.9:-133 NM_001305982:-133 NR_155015:-133 LF198886:-134 MA434463:-134 BC156119:301 BC157111:301 |
TATA-Box annotation
| Distance to TSS: | 138 |
|---|---|
| Nearest PromoterID: | NM_001305982 |
| Entrez ID: | 71743 |
| Nearest Unigene: | Mm.182271 |
| Nearest Refseq: | NM_027896 |
| Nearest Ensembl: | ENSMUSG00000001755 |
| Gene Name: | Coenzyme A synthase |
| Gene Alias: | 1300003G02Rik|Dpck|Ppat|Ukr1 |
| Gene Description: | Coenzyme A synthase |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
