Difference between revisions of "TSS:Mm 99249.1"
From referenceTSS
| Line 3: | Line 3: | ||
|Ppat= | |Ppat= | ||
|Ukr1= | |Ukr1= | ||
| − | |all_trans=BC064753:-41 AF521095:-53 AK166894:-87 ENSMUST00000107308.3 | + | |all_trans=BC064753:-41 AF521095:-53 AK166894:-87 ENSMUST00000107308.3:-93 AK159912:-93 ENSMUST00000151056.7:-100 AK159405:-101 AK170330:-102 AK004878:-112 ENSMUST00000001806.9:-153 NM_001305982:-153 NR_155015:-153 LF198886:-154 MA434463:-154 BC156119:283 BC157111:283 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| Line 12: | Line 12: | ||
|entrez_id=71743 | |entrez_id=71743 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| − | |gene_alias=1300003G02Rik | + | |gene_alias=1300003G02Rik{{!}}Dpck{{!}}Ppat{{!}}Ukr1 |
|gene_description=Coenzyme A synthase | |gene_description=Coenzyme A synthase | ||
|gene_id=71743 | |gene_id=71743 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_027896 | |nearest_refseq=NM_027896 | ||
|nearest_unigene=Mm.182271 | |nearest_unigene=Mm.182271 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=mouse | |species=mouse | ||
|start=101082717 | |start=101082717 | ||
Revision as of 03:47, 22 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 101082721 |
|---|---|
| End of the center position in the TSS region: | 101082722 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC064753 |
|---|---|
| Distance: | -41 |
| Num_trans: | 16 |
| All_trans: | BC064753:-41 AF521095:-53 AK166894:-87 ENSMUST00000107308.3:-93 AK159912:-93 ENSMUST00000151056.7:-100 AK159405:-101 AK170330:-102 AK004878:-112 ENSMUST00000001806.9:-153 NM_001305982:-153 NR_155015:-153 LF198886:-154 MA434463:-154 BC156119:283 BC157111:283 |
TATA-Box annotation
| Distance to TSS: | 157 |
|---|---|
| Nearest PromoterID: | NM_001305982 |
| Entrez ID: | 71743 |
| Nearest Unigene: | Mm.182271 |
| Nearest Refseq: | NM_027896 |
| Nearest Ensembl: | ENSMUSG00000001755 |
| Gene Name: | Coenzyme A synthase |
| Gene Alias: | 1300003G02Rik|Dpck|Ppat|Ukr1 |
| Gene Description: | Coenzyme A synthase |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
