Difference between revisions of "TSS:Mm 99252.1"
From referenceTSS
| Line 3: | Line 3: | ||
|AI503389= | |AI503389= | ||
|Tubg= | |Tubg= | ||
| − | |all_trans=NM_134024 | + | |all_trans=NM_134024:0 AK160125:0 BC006581:0 AK192509:3 AK183189:3 AK154019:6 AB158480:7 AK196283:75 ENSMUST00000043680.8:-170 LF198889:-172 MA434466:-172 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=15 |
|end=101120157 | |end=101120157 | ||
|end_of_center_position=101120133 | |end_of_center_position=101120133 | ||
|entrez_id=103733 | |entrez_id=103733 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=1500010O08Rik | + | |gene_alias=1500010O08Rik{{!}}AI451582{{!}}AI503389{{!}}GCP-1{{!}}Tubg |
| − | |gene_description= | + | |gene_description=tubulin, gamma 1 |
|gene_id=103733 | |gene_id=103733 | ||
| − | |gene_name= | + | |gene_name=tubulin, gamma 1 |
|gene_source=MGI:101834 | |gene_source=MGI:101834 | ||
|gene_symbol=Tubg1 | |gene_symbol=Tubg1 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_134024 | |nearest_refseq=NM_134024 | ||
|nearest_unigene=Mm.479145 | |nearest_unigene=Mm.479145 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=mouse | |species=mouse | ||
|start=101120107 | |start=101120107 | ||
|start_of_center_position=101120132 | |start_of_center_position=101120132 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_134024 | + | |transcript_name=NM_134024 AK160125 BC006581 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99252.1 | |tss_id=mm_99252.1 | ||
Revision as of 03:47, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 101120132 |
|---|---|
| End of the center position in the TSS region: | 101120133 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_134024 AK160125 BC006581 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | NM_134024:0 AK160125:0 BC006581:0 AK192509:3 AK183189:3 AK154019:6 AB158480:7 AK196283:75 ENSMUST00000043680.8:-170 LF198889:-172 MA434466:-172 |
TATA-Box annotation
| Distance to TSS: | 15 |
|---|---|
| Nearest PromoterID: | NM_134024 |
| Entrez ID: | 103733 |
| Nearest Unigene: | Mm.479145 |
| Nearest Refseq: | NM_134024 |
| Nearest Ensembl: | ENSMUSG00000035198 |
| Gene Name: | tubulin, gamma 1 |
| Gene Alias: | 1500010O08Rik|AI451582|AI503389|GCP-1|Tubg |
| Gene Description: | tubulin, gamma 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
