Difference between revisions of "TSS:Mm 99264.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NM_019444 | + | |all_trans=NM_019444:-12 ENSMUST00000149006.1:-34 BC036348:40 ENSMUST00000128260.8:41 AK003810:63 ENSMUST00000122006.7:79 AF146523:79 BC051201:79 BC069992:80 AF209906:81 AJ250490:81 ENSMUST00000149585.7:82 ENSMUST00000151830.1:217 ENSMUST00000129680.7:-318 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| Line 11: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=receptor (calcitonin) activity modifying protein 2 | |gene_description=receptor (calcitonin) activity modifying protein 2 | ||
| − | |gene_id= | + | |gene_id=54409 |
| − | |gene_name=receptor (calcitonin) activity modifying protein 2 | + | |gene_name=receptor (calcitonin) activity modifying protein 2 |
| − | |gene_source= | + | |gene_source=MGI:1859650 |
| − | |gene_symbol=Ramp2 | + | |gene_symbol=Ramp2 |
| − | |gene_synonyms= | + | |gene_synonyms= |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id= | + | |hgnc_mgi_id=MGI:1859650 |
|nearest_ensembl=ENSMUSG00000001240 | |nearest_ensembl=ENSMUSG00000001240 | ||
|nearest_promoter_id=NM_019444 | |nearest_promoter_id=NM_019444 | ||
|nearest_refseq=NM_019444 | |nearest_refseq=NM_019444 | ||
|nearest_unigene=Mm.260698 | |nearest_unigene=Mm.260698 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=mouse | |species=mouse | ||
|start=101246345 | |start=101246345 | ||
|start_of_center_position=101246347 | |start_of_center_position=101246347 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_019444 | + | |transcript_name=NM_019444 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_99264.1 | |tss_id=mm_99264.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q9WUP0 |
}} | }} | ||
Revision as of 03:47, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 101246347 |
|---|---|
| End of the center position in the TSS region: | 101246348 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_019444 |
|---|---|
| Distance: | -12 |
| Num_trans: | 14 |
| All_trans: | NM_019444:-12 ENSMUST00000149006.1:-34 BC036348:40 ENSMUST00000128260.8:41 AK003810:63 ENSMUST00000122006.7:79 AF146523:79 BC051201:79 BC069992:80 AF209906:81 AJ250490:81 ENSMUST00000149585.7:82 ENSMUST00000151830.1:217 ENSMUST00000129680.7:-318 |
TATA-Box annotation
| Distance to TSS: | 14 |
|---|---|
| Nearest PromoterID: | NM_019444 |
| Entrez ID: | 54409 |
| Nearest Unigene: | Mm.260698 |
| Nearest Refseq: | NM_019444 |
| Nearest Ensembl: | ENSMUSG00000001240 |
| Gene Name: | receptor (calcitonin) activity modifying protein 2 |
| Gene Alias: | - |
| Gene Description: | receptor (calcitonin) activity modifying protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
