Difference between revisions of "TSS:Mm 99266.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000128260.8:0 BC036348:0 AK003810:22 ENSMUST00000122006.7:38 AF146523:38 BC051201:38 BC069992:39 AF209906:40 AJ250490:40 ENSMUST00000149585.7:41 NM_019444 | + | |all_trans=ENSMUST00000128260.8:0 BC036348:0 AK003810:22 ENSMUST00000122006.7:38 AF146523:38 BC051201:38 BC069992:39 AF209906:40 AJ250490:40 ENSMUST00000149585.7:41 NM_019444:-50 ENSMUST00000149006.1:-72 ENSMUST00000151830.1:176 ENSMUST00000129680.7:-356 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_019444 | |nearest_refseq=NM_019444 | ||
|nearest_unigene=Mm.260698 | |nearest_unigene=Mm.260698 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=mouse | |species=mouse | ||
|start=101246383 | |start=101246383 | ||
Revision as of 03:47, 22 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 101246387 |
|---|---|
| End of the center position in the TSS region: | 101246388 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000128260.8 BC036348 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENSMUST00000128260.8:0 BC036348:0 AK003810:22 ENSMUST00000122006.7:38 AF146523:38 BC051201:38 BC069992:39 AF209906:40 AJ250490:40 ENSMUST00000149585.7:41 NM_019444:-50 ENSMUST00000149006.1:-72 ENSMUST00000151830.1:176 ENSMUST00000129680.7:-356 |
TATA-Box annotation
| Distance to TSS: | 53 |
|---|---|
| Nearest PromoterID: | NM_019444 |
| Entrez ID: | 54409 |
| Nearest Unigene: | Mm.260698 |
| Nearest Refseq: | NM_019444 |
| Nearest Ensembl: | ENSMUSG00000001240 |
| Gene Name: | receptor (calcitonin) activity modifying protein 2 |
| Gene Alias: | - |
| Gene Description: | receptor (calcitonin) activity modifying protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
