Difference between revisions of "TSS:Mm 99316.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AF214527:37 AK132027:40 AK146291:40 AK008120:43 AK012566:48 AK010627:51 AK002945:52 BC024366:54 BC082284:54 AK088211:58 ENSMUST00000139939.1:60 BC090395:63 ENSMUST00000107249.7:68 ENSMUST00000077856.12:-70 NM_011289 | + | |all_trans=AF214527:37 AK132027:40 AK146291:40 AK008120:43 AK012566:48 AK010627:51 AK002945:52 BC024366:54 BC082284:54 AK088211:58 ENSMUST00000139939.1:60 BC090395:63 ENSMUST00000107249.7:68 ENSMUST00000077856.12:-70 NM_011289:-123 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_011289 | |nearest_refseq=NM_011289 | ||
|nearest_unigene=Mm.340658 | |nearest_unigene=Mm.340658 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=mouse | |species=mouse | ||
|start=101442367 | |start=101442367 | ||
Revision as of 03:48, 22 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 101442372 |
|---|---|
| End of the center position in the TSS region: | 101442373 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AF214527 |
|---|---|
| Distance: | 37 |
| Num_trans: | 15 |
| All_trans: | AF214527:37 AK132027:40 AK146291:40 AK008120:43 AK012566:48 AK010627:51 AK002945:52 BC024366:54 BC082284:54 AK088211:58 ENSMUST00000139939.1:60 BC090395:63 ENSMUST00000107249.7:68 ENSMUST00000077856.12:-70 NM_011289:-123 |
TATA-Box annotation
| Distance to TSS: | 128 |
|---|---|
| Nearest PromoterID: | NM_011289 |
| Entrez ID: | 19942 |
| Nearest Unigene: | Mm.340658 |
| Nearest Refseq: | NM_011289 |
| Nearest Ensembl: | ENSMUSG00000063316 |
| Gene Name: | ribosomal protein L27 |
| Gene Alias: | - |
| Gene Description: | ribosomal protein L27 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
