Difference between revisions of "TSS:Mm 99323.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000107249.7:-232 BC090395:-237 ENSMUST00000139939.1:-240 AK088211:-242 BC024366:-246 BC082284:-246 AK002945:-248 AK010627:-249 AK012566:-252 AK008120:-257 AK132027:-260 AK146291:-260 AF214527:-263 ENSMUST00000077856.12:-380 NM_011289 | + | |all_trans=ENSMUST00000107249.7:-232 BC090395:-237 ENSMUST00000139939.1:-240 AK088211:-242 BC024366:-246 BC082284:-246 AK002945:-248 AK010627:-249 AK012566:-252 AK008120:-257 AK132027:-260 AK146291:-260 AF214527:-263 ENSMUST00000077856.12:-380 NM_011289:-433 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_011289 | |nearest_refseq=NM_011289 | ||
|nearest_unigene=Mm.340658 | |nearest_unigene=Mm.340658 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=mouse | |species=mouse | ||
|start=101442677 | |start=101442677 | ||
Revision as of 03:49, 22 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 101442680 |
|---|---|
| End of the center position in the TSS region: | 101442681 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000107249.7 |
|---|---|
| Distance: | -232 |
| Num_trans: | 15 |
| All_trans: | ENSMUST00000107249.7:-232 BC090395:-237 ENSMUST00000139939.1:-240 AK088211:-242 BC024366:-246 BC082284:-246 AK002945:-248 AK010627:-249 AK012566:-252 AK008120:-257 AK132027:-260 AK146291:-260 AF214527:-263 ENSMUST00000077856.12:-380 NM_011289:-433 |
TATA-Box annotation
| Distance to TSS: | 436 |
|---|---|
| Nearest PromoterID: | NM_011289 |
| Entrez ID: | 19942 |
| Nearest Unigene: | Mm.340658 |
| Nearest Refseq: | NM_011289 |
| Nearest Ensembl: | ENSMUSG00000063316 |
| Gene Name: | ribosomal protein L27 |
| Gene Alias: | - |
| Gene Description: | ribosomal protein L27 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
