Difference between revisions of "TSS:Mm 99337.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|Rohn= | |Rohn= | ||
| − | |all_trans=ENSMUST00000001347.6:-26 BC139330:30 BC139331:30 | + | |all_trans=ENSMUST00000001347.6:-26 NM_009708:-26 BC139330:30 BC139331:30 BC107022:103 BC128475:104 BC127034:109 AF016482:120 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|distance=-26 | |distance=-26 | ||
| − | |distance_to_tss= | + | |distance_to_tss=43 |
|end=101468235 | |end=101468235 | ||
|end_of_center_position=101468218 | |end_of_center_position=101468218 | ||
|entrez_id=11858 | |entrez_id=11858 | ||
|gc_percent=0.840796 | |gc_percent=0.840796 | ||
| − | |gene_alias=Arhn | + | |gene_alias=Arhn{{!}}Rohn{{!}}rho7 |
|gene_description=Rho family GTPase 2 | |gene_description=Rho family GTPase 2 | ||
|gene_id=11858 | |gene_id=11858 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_009708 | |nearest_refseq=NM_009708 | ||
|nearest_unigene=Mm.378883 | |nearest_unigene=Mm.378883 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=mouse | |species=mouse | ||
|start=101468200 | |start=101468200 | ||
|start_of_center_position=101468217 | |start_of_center_position=101468217 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000001347.6 | + | |transcript_name=ENSMUST00000001347.6 NM_009708 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99337.1 | |tss_id=mm_99337.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A2A4Q3 | + | |uniprot_id=A2A4Q3 Q9QYM5 |
}} | }} | ||
Revision as of 03:49, 22 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 101468217 |
|---|---|
| End of the center position in the TSS region: | 101468218 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000001347.6 NM_009708 |
|---|---|
| Distance: | -26 |
| Num_trans: | 8 |
| All_trans: | ENSMUST00000001347.6:-26 NM_009708:-26 BC139330:30 BC139331:30 BC107022:103 BC128475:104 BC127034:109 AF016482:120 |
TATA-Box annotation
| Distance to TSS: | 43 |
|---|---|
| Nearest PromoterID: | NM_009708 |
| Entrez ID: | 11858 |
| Nearest Unigene: | Mm.378883 |
| Nearest Refseq: | NM_009708 |
| Nearest Ensembl: | ENSMUSG00000001313 |
| Gene Name: | Rho family GTPase 2 |
| Gene Alias: | Arhn|Rohn|rho7 |
| Gene Description: | Rho family GTPase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.840796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
