Difference between revisions of "TSS:Mm 9934.1"
From referenceTSS
| Line 3: | Line 3: | ||
|KMT3C= | |KMT3C= | ||
|Zmynd14= | |Zmynd14= | ||
| − | |all_trans=ENSMUST00000027897.7:43 AK150857:115 AK145261:115 | + | |all_trans=ENSMUST00000027897.7:43 NM_026796:115 AK150857:115 AK145261:115 BC023119:118 ENSMUST00000144452.1:153 AK164053:153 AK204951:210 AK197062:212 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
|distance=43 | |distance=43 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-120 |
|end=189922416 | |end=189922416 | ||
|end_of_center_position=189922411 | |end_of_center_position=189922411 | ||
|entrez_id=226830 | |entrez_id=226830 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
| − | |gene_alias=1110020E07Rik | + | |gene_alias=1110020E07Rik{{!}}4930402C15{{!}}KMT3C{{!}}Zmynd14 |
|gene_description=SET and MYND domain containing 2 | |gene_description=SET and MYND domain containing 2 | ||
|gene_id=226830 | |gene_id=226830 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_026796 | |nearest_refseq=NM_026796 | ||
|nearest_unigene=Mm.156895 | |nearest_unigene=Mm.156895 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=mouse | |species=mouse | ||
|start=189922405 | |start=189922405 | ||
Revision as of 03:49, 22 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 189922410 |
|---|---|
| End of the center position in the TSS region: | 189922411 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000027897.7 |
|---|---|
| Distance: | 43 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000027897.7:43 NM_026796:115 AK150857:115 AK145261:115 BC023119:118 ENSMUST00000144452.1:153 AK164053:153 AK204951:210 AK197062:212 |
TATA-Box annotation
| Distance to TSS: | -120 |
|---|---|
| Nearest PromoterID: | NM_026796 |
| Entrez ID: | 226830 |
| Nearest Unigene: | Mm.156895 |
| Nearest Refseq: | NM_026796 |
| Nearest Ensembl: | ENSMUSG00000026603 |
| Gene Name: | SET and MYND domain containing 2 |
| Gene Alias: | 1110020E07Rik|4930402C15|KMT3C|Zmynd14 |
| Gene Description: | SET and MYND domain containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
