Difference between revisions of "TSS:Mm 99367.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000156842.1:0 AK172600:0 AK078552:0 AK142226:0 BC065064:0 AK170616:0 ENSMUST00000129741.1:1 AK220485:-15 BC132445:-40 NM_144831 | + | |all_trans=ENSMUST00000156842.1:0 AK172600:0 AK078552:0 AK142226:0 BC065064:0 AK170616:0 ENSMUST00000129741.1:1 AK220485:-15 BC132445:-40 NM_144831:-56 AK153829:-56 ENSMUST00000039152.13:-62 ENSMUST00000125409.1:-93 LF198903:-94 MA434480:-94 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| Line 9: | Line 9: | ||
|entrez_id=217207 | |entrez_id=217207 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=Ddx8 | + | |gene_alias=Ddx8{{!}}mDEAH6{{!}}mKIAA4096 |
|gene_description=DEAH (Asp-Glu-Ala-His) box polypeptide 8 | |gene_description=DEAH (Asp-Glu-Ala-His) box polypeptide 8 | ||
|gene_id=217207 | |gene_id=217207 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_144831 | |nearest_refseq=NM_144831 | ||
|nearest_unigene=Mm.28186 | |nearest_unigene=Mm.28186 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=mouse | |species=mouse | ||
|start=101733011 | |start=101733011 | ||
Revision as of 03:50, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 101733025 |
|---|---|
| End of the center position in the TSS region: | 101733026 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000156842.1 AK172600 AK078552 AK142226 BC065064 AK170616 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | ENSMUST00000156842.1:0 AK172600:0 AK078552:0 AK142226:0 BC065064:0 AK170616:0 ENSMUST00000129741.1:1 AK220485:-15 BC132445:-40 NM_144831:-56 AK153829:-56 ENSMUST00000039152.13:-62 ENSMUST00000125409.1:-93 LF198903:-94 MA434480:-94 |
TATA-Box annotation
| Distance to TSS: | 70 |
|---|---|
| Nearest PromoterID: | NM_144831 |
| Entrez ID: | 217207 |
| Nearest Unigene: | Mm.28186 |
| Nearest Refseq: | NM_144831 |
| Nearest Ensembl: | ENSMUSG00000034931 |
| Gene Name: | DEAH (Asp-Glu-Ala-His) box polypeptide 8 |
| Gene Alias: | Ddx8|mDEAH6|mKIAA4096 |
| Gene Description: | DEAH (Asp-Glu-Ala-His) box polypeptide 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
