Difference between revisions of "TSS:Mm 99392.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000129799.7:43 NM_145829 | + | |all_trans=LF203084:4 MA438661:4 ENSMUST00000129799.7:43 NM_145829:43 BC036161:43 ENSMUST00000055409.5:79 BC057990:79 AF462069:90 AJ489814:117 LF203930:473 MA439507:473 |
|argA= | |argA= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| − | |distance= | + | |distance=4 |
|distance_to_tss=-44 | |distance_to_tss=-44 | ||
|end=102145470 | |end=102145470 | ||
| Line 10: | Line 10: | ||
|entrez_id=217214 | |entrez_id=217214 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=1700120E20Rik | + | |gene_alias=1700120E20Rik{{!}}argA |
|gene_description=N-acetylglutamate synthase | |gene_description=N-acetylglutamate synthase | ||
|gene_id=217214 | |gene_id=217214 | ||
| − | |gene_name= | + | |gene_name=Nags |
|gene_source=MGI:2387600 | |gene_source=MGI:2387600 | ||
|gene_symbol=Nags | |gene_symbol=Nags | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_145829 | |nearest_refseq=NM_145829 | ||
|nearest_unigene=Mm.31686 | |nearest_unigene=Mm.31686 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=mouse | |species=mouse | ||
|start=102145467 | |start=102145467 | ||
|start_of_center_position=102145468 | |start_of_center_position=102145468 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF203084 MA438661 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99392.1 | |tss_id=mm_99392.1 | ||
Latest revision as of 03:50, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 102145468 |
|---|---|
| End of the center position in the TSS region: | 102145469 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF203084 MA438661 |
|---|---|
| Distance: | 4 |
| Num_trans: | 11 |
| All_trans: | LF203084:4 MA438661:4 ENSMUST00000129799.7:43 NM_145829:43 BC036161:43 ENSMUST00000055409.5:79 BC057990:79 AF462069:90 AJ489814:117 LF203930:473 MA439507:473 |
TATA-Box annotation
| Distance to TSS: | -44 |
|---|---|
| Nearest PromoterID: | NM_145829 |
| Entrez ID: | 217214 |
| Nearest Unigene: | Mm.31686 |
| Nearest Refseq: | NM_145829 |
| Nearest Ensembl: | ENSMUSG00000048217 |
| Gene Name: | Nags |
| Gene Alias: | 1700120E20Rik|argA |
| Gene Description: | N-acetylglutamate synthase |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
