Difference between revisions of "TSS:Mm 99462.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000125819.8:0 ENSMUST00000127530.2:9 AK212296:-35 AK181447:72 AK184964:72 AK187351:72 AK188116:72 AK190913:72 ENSMUST00000177428.1:119 AK204596:-164 AK204598:-164 | + | |all_trans=ENSMUST00000125819.8:0 ENSMUST00000127530.2:9 LF230897:-19 MA466474:-19 AK212296:-35 LF230898:42 MA466475:42 AK181447:72 AK184964:72 AK187351:72 AK188116:72 AK190913:72 ENSMUST00000177428.1:119 AK204596:-164 AK204598:-164 LF230899:438 MA466476:438 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=4781 |
|end=102435297 | |end=102435297 | ||
|end_of_center_position=102435288 | |end_of_center_position=102435288 | ||
| Line 10: | Line 10: | ||
|epithelin= | |epithelin= | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| − | |gene_alias=Pgrn | + | |gene_alias=GP88{{!}}PCDGF{{!}}PEPI{{!}}Pgrn{{!}}epithelin |
|gene_description=granulin | |gene_description=granulin | ||
|gene_id=14824 | |gene_id=14824 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_008175 | |nearest_refseq=NM_008175 | ||
|nearest_unigene=Mm.1568 | |nearest_unigene=Mm.1568 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=mouse | |species=mouse | ||
|start=102435278 | |start=102435278 | ||
Revision as of 03:52, 22 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 102435287 |
|---|---|
| End of the center position in the TSS region: | 102435288 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000125819.8 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENSMUST00000125819.8:0 ENSMUST00000127530.2:9 LF230897:-19 MA466474:-19 AK212296:-35 LF230898:42 MA466475:42 AK181447:72 AK184964:72 AK187351:72 AK188116:72 AK190913:72 ENSMUST00000177428.1:119 AK204596:-164 AK204598:-164 LF230899:438 MA466476:438 |
TATA-Box annotation
| Distance to TSS: | 4781 |
|---|---|
| Nearest PromoterID: | NM_008175 |
| Entrez ID: | 14824 |
| Nearest Unigene: | Mm.1568 |
| Nearest Refseq: | NM_008175 |
| Nearest Ensembl: | ENSMUSG00000034708 |
| Gene Name: | granulin |
| Gene Alias: | GP88|PCDGF|PEPI|Pgrn|epithelin |
| Gene Description: | granulin |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
