Difference between revisions of "TSS:Mm 99471.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK185467:-103 AK217383:377 | + | |all_trans=AK185467:-103 LF230900:233 MA466477:233 LF230901:367 MA466478:367 AK217383:377 LF230899:-430 MA466476:-430 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=-103 | |distance=-103 | ||
| − | |distance_to_tss= | + | |distance_to_tss=5670 |
|end=102436189 | |end=102436189 | ||
|end_of_center_position=102436177 | |end_of_center_position=102436177 | ||
| Line 10: | Line 10: | ||
|epithelin= | |epithelin= | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| − | |gene_alias=Pgrn | + | |gene_alias=GP88{{!}}PCDGF{{!}}PEPI{{!}}Pgrn{{!}}epithelin |
|gene_description=granulin | |gene_description=granulin | ||
|gene_id=14824 | |gene_id=14824 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_008175 | |nearest_refseq=NM_008175 | ||
|nearest_unigene=Mm.1568 | |nearest_unigene=Mm.1568 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=mouse | |species=mouse | ||
|start=102436164 | |start=102436164 | ||
Revision as of 03:52, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 102436176 |
|---|---|
| End of the center position in the TSS region: | 102436177 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK185467 |
|---|---|
| Distance: | -103 |
| Num_trans: | 8 |
| All_trans: | AK185467:-103 LF230900:233 MA466477:233 LF230901:367 MA466478:367 AK217383:377 LF230899:-430 MA466476:-430 |
TATA-Box annotation
| Distance to TSS: | 5670 |
|---|---|
| Nearest PromoterID: | NM_008175 |
| Entrez ID: | 14824 |
| Nearest Unigene: | Mm.1568 |
| Nearest Refseq: | NM_008175 |
| Nearest Ensembl: | ENSMUSG00000034708 |
| Gene Name: | granulin |
| Gene Alias: | GP88|PCDGF|PEPI|Pgrn|epithelin |
| Gene Description: | granulin |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
