Difference between revisions of "TSS:Mm 99494.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000107072.1:0 AK009942:0 ENSMUST00000021302.14:-130 NM_080846 | + | |all_trans=ENSMUST00000107072.1:0 AK009942:0 ENSMUST00000021302.14:-130 NM_080846:-130 BC005568:-130 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
|gene_alias=2310056K19Rik | |gene_alias=2310056K19Rik | ||
| − | |gene_description= | + | |gene_description=HIG1 domain family, member 1B |
|gene_id=75689 | |gene_id=75689 | ||
| − | |gene_name= | + | |gene_name=HIG1 domain family, member 1B |
|gene_source=MGI:1922939 | |gene_source=MGI:1922939 | ||
|gene_symbol=Higd1b | |gene_symbol=Higd1b | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_080846 | |nearest_refseq=NM_080846 | ||
|nearest_unigene=Mm.44408 | |nearest_unigene=Mm.44408 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=mouse | |species=mouse | ||
|start=102836425 | |start=102836425 | ||
Revision as of 03:52, 22 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 102836441 |
|---|---|
| End of the center position in the TSS region: | 102836442 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000107072.1 AK009942 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | ENSMUST00000107072.1:0 AK009942:0 ENSMUST00000021302.14:-130 NM_080846:-130 BC005568:-130 |
TATA-Box annotation
| Distance to TSS: | 146 |
|---|---|
| Nearest PromoterID: | NM_080846 |
| Entrez ID: | 75689 |
| Nearest Unigene: | Mm.44408 |
| Nearest Refseq: | NM_080846 |
| Nearest Ensembl: | ENSMUSG00000020928 |
| Gene Name: | HIG1 domain family, member 1B |
| Gene Alias: | 2310056K19Rik |
| Gene Description: | HIG1 domain family, member 1B |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
