Difference between revisions of "TSS:Mm 9952.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000166139.6:-24 NR_027352:-24 | + | |all_trans=ENSMUST00000166139.6:-24 NR_027352:-24 AK078596:-24 LF193091:-25 MA428668:-25 AK045261:38 ENSMUST00000192306.1:48 AK163193:58 BC024141:63 ENSMUST00000047409.8:260 NM_144879:264 AK140989:271 LF202377:-426 MA437954:-426 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_144879 | |nearest_refseq=NM_144879 | ||
|nearest_unigene=Mm.22856 | |nearest_unigene=Mm.22856 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=mouse | |species=mouse | ||
|start=190979261 | |start=190979261 | ||
|start_of_center_position=190979266 | |start_of_center_position=190979266 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000166139.6 NR_027352 | + | |transcript_name=ENSMUST00000166139.6 NR_027352 AK078596 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_9952.1 | |tss_id=mm_9952.1 | ||
Revision as of 03:53, 22 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 190979266 |
|---|---|
| End of the center position in the TSS region: | 190979267 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000166139.6 NR_027352 AK078596 |
|---|---|
| Distance: | -24 |
| Num_trans: | 14 |
| All_trans: | ENSMUST00000166139.6:-24 NR_027352:-24 AK078596:-24 LF193091:-25 MA428668:-25 AK045261:38 ENSMUST00000192306.1:48 AK163193:58 BC024141:63 ENSMUST00000047409.8:260 NM_144879:264 AK140989:271 LF202377:-426 MA437954:-426 |
TATA-Box annotation
| Distance to TSS: | 29 |
|---|---|
| Nearest PromoterID: | NR_027352 |
| Entrez ID: | 226841 |
| Nearest Unigene: | Mm.22856 |
| Nearest Refseq: | NM_144879 |
| Nearest Ensembl: | ENSMUSG00000037568 |
| Gene Name: | vasohibin 2 |
| Gene Alias: | B130052G07Rik |
| Gene Description: | vasohibin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
