Difference between revisions of "TSS:Mm 99553.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=NR_131109:-15 NR_131143:-15 AK018891:16 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_131109 | |nearest_refseq=NR_131109 | ||
|nearest_unigene=Mm.398236 | |nearest_unigene=Mm.398236 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=mouse | |species=mouse | ||
|start=103638950 | |start=103638950 | ||
|start_of_center_position=103638952 | |start_of_center_position=103638952 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NR_131143 | + | |transcript_name=NR_131109 NR_131143 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99553.1 | |tss_id=mm_99553.1 | ||
Revision as of 03:54, 22 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 103638952 |
|---|---|
| End of the center position in the TSS region: | 103638953 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NR_131109 NR_131143 |
|---|---|
| Distance: | -15 |
| Num_trans: | 3 |
| All_trans: | NR_131109:-15 NR_131143:-15 AK018891:16 |
TATA-Box annotation
| Distance to TSS: | 17 |
|---|---|
| Nearest PromoterID: | NR_131143 |
| Entrez ID: | 78629 |
| Nearest Unigene: | Mm.398236 |
| Nearest Refseq: | NR_131109 |
| Nearest Ensembl: | |
| Gene Name: | RIKEN cDNA 1700072I22 gene |
| Gene Alias: | - |
| Gene Description: | RIKEN cDNA 1700072I22 gene |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
