Difference between revisions of "TSS:Mm 99583.1"
From referenceTSS
| Line 12: | Line 12: | ||
|entrez_id=17762 | |entrez_id=17762 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| − | |gene_alias=AI413597 | + | |gene_alias=AI413597{{!}}AW045860{{!}}Mtapt{{!}}Tau |
|gene_description=microtubule-associated protein tau | |gene_description=microtubule-associated protein tau | ||
|gene_id=17762 | |gene_id=17762 | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=MGI:97180 | |hgnc_mgi_id=MGI:97180 | ||
|nearest_ensembl=ENSMUSG00000018411 | |nearest_ensembl=ENSMUSG00000018411 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001285456 |
|nearest_refseq=NM_010838 | |nearest_refseq=NM_010838 | ||
|nearest_unigene=Mm.1287 | |nearest_unigene=Mm.1287 | ||
| Line 30: | Line 30: | ||
|start_of_center_position=104282381 | |start_of_center_position=104282381 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=88(TGGCTTAAAAGG,-,0.00) |
|transcript_name=ENSMUST00000106988.7 ENSMUST00000106989.2 AF483518 AF483519 | |transcript_name=ENSMUST00000106988.7 ENSMUST00000106989.2 AF483518 AF483519 | ||
|tss_classification=no | |tss_classification=no | ||
Revision as of 03:54, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 104282381 |
|---|---|
| End of the center position in the TSS region: | 104282382 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000106988.7 ENSMUST00000106989.2 AF483518 AF483519 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENSMUST00000106988.7:0 ENSMUST00000106989.2:0 AF483518:0 AF483519:0 |
TATA-Box annotation
| Distance to TSS: | 50946 |
|---|---|
| Nearest PromoterID: | NM_001285456 |
| Entrez ID: | 17762 |
| Nearest Unigene: | Mm.1287 |
| Nearest Refseq: | NM_010838 |
| Nearest Ensembl: | ENSMUSG00000018411 |
| Gene Name: | microtubule-associated protein tau |
| Gene Alias: | AI413597|AW045860|Mtapt|Tau |
| Gene Description: | microtubule-associated protein tau |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 88(TGGCTTAAAAGG,-,0.00) |
