Difference between revisions of "TSS:Mm 99601.1"
From referenceTSS
| Line 6: | Line 6: | ||
|MLC1a= | |MLC1a= | ||
|Myla= | |Myla= | ||
| − | |all_trans=ENSMUST00000018800.8:-20 NM_010858 | + | |all_trans=ENSMUST00000018800.8:-20 NM_010858:-20 BC048485:-20 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| Line 15: | Line 15: | ||
|entrez_id=17896 | |entrez_id=17896 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=ALC1 | + | |gene_alias=ALC1{{!}}AMLC{{!}}ELC{{!}}ELC1a{{!}}GT1{{!}}MLC1EMB{{!}}MLC1a{{!}}Myla |
| − | |gene_description= | + | |gene_description=myosin, light polypeptide 4 |
|gene_id=17896 | |gene_id=17896 | ||
| − | |gene_name= | + | |gene_name=myosin, light polypeptide 4 |
|gene_source=MGI:97267 | |gene_source=MGI:97267 | ||
|gene_symbol=Myl4 | |gene_symbol=Myl4 | ||
| Line 28: | Line 28: | ||
|nearest_refseq=NM_010858 | |nearest_refseq=NM_010858 | ||
|nearest_unigene=Mm.390355 | |nearest_unigene=Mm.390355 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=mouse | |species=mouse | ||
|start=104550682 | |start=104550682 | ||
|start_of_center_position=104550683 | |start_of_center_position=104550683 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000018800.8 NM_010858 | + | |transcript_name=ENSMUST00000018800.8 NM_010858 BC048485 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99601.1 | |tss_id=mm_99601.1 | ||
Revision as of 03:55, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 104550683 |
|---|---|
| End of the center position in the TSS region: | 104550684 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000018800.8 NM_010858 BC048485 |
|---|---|
| Distance: | -20 |
| Num_trans: | 3 |
| All_trans: | ENSMUST00000018800.8:-20 NM_010858:-20 BC048485:-20 |
TATA-Box annotation
| Distance to TSS: | 21 |
|---|---|
| Nearest PromoterID: | NM_010858 |
| Entrez ID: | 17896 |
| Nearest Unigene: | Mm.390355 |
| Nearest Refseq: | NM_010858 |
| Nearest Ensembl: | ENSMUSG00000061086 |
| Gene Name: | myosin, light polypeptide 4 |
| Gene Alias: | ALC1|AMLC|ELC|ELC1a|GT1|MLC1EMB|MLC1a|Myla |
| Gene Description: | myosin, light polypeptide 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
