Difference between revisions of "TSS:Mm 99644.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC116642:6 U56734:-17 AK028157:-29 ENSMUST00000021038.4:-32 ENSMUST00000100335.9:-54 NM_008626:-54 | + | |all_trans=BC116642:6 U56734:-17 AK028157:-29 ENSMUST00000021038.4:-32 ENSMUST00000100335.9:-54 NM_008626:-54 ENSMUST00000126931.1:-57 AK054150:-57 LF198941:-58 MA434518:-58 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| Line 9: | Line 9: | ||
|entrez_id=17534 | |entrez_id=17534 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=Endo180 | + | |gene_alias=Endo180{{!}}mKIAA0709{{!}}uPARAP |
| − | |gene_description= | + | |gene_description=mannose receptor, C type 2 |
|gene_id=17534 | |gene_id=17534 | ||
| − | |gene_name= | + | |gene_name=mannose receptor, C type 2 |
|gene_source=MGI:107818 | |gene_source=MGI:107818 | ||
|gene_symbol=Mrc2 | |gene_symbol=Mrc2 | ||
| Line 33: | Line 33: | ||
|tss_score=1 | |tss_score=1 | ||
|uPARAP= | |uPARAP= | ||
| − | |uniprot_id= | + | |uniprot_id=Q14AX9 |
}} | }} | ||
Revision as of 03:56, 22 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 105292706 |
|---|---|
| End of the center position in the TSS region: | 105292707 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC116642 |
|---|---|
| Distance: | 6 |
| Num_trans: | 10 |
| All_trans: | BC116642:6 U56734:-17 AK028157:-29 ENSMUST00000021038.4:-32 ENSMUST00000100335.9:-54 NM_008626:-54 ENSMUST00000126931.1:-57 AK054150:-57 LF198941:-58 MA434518:-58 |
TATA-Box annotation
| Distance to TSS: | 61 |
|---|---|
| Nearest PromoterID: | NM_008626 |
| Entrez ID: | 17534 |
| Nearest Unigene: | Mm.235616 |
| Nearest Refseq: | NM_008626 |
| Nearest Ensembl: | ENSMUSG00000020695 |
| Gene Name: | mannose receptor, C type 2 |
| Gene Alias: | Endo180|mKIAA0709|uPARAP |
| Gene Description: | mannose receptor, C type 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
