Difference between revisions of "TSS:Mm 99714.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000021049.8:0 ENSMUST00000133131.1:0 AK012294:0 BC030840:0 AK010505:0 AK135451:4 AK145703:9 NM_008950 | + | |all_trans=ENSMUST00000021049.8:0 ENSMUST00000133131.1:0 AK012294:0 KY499681:0 BC030840:0 AK010505:0 AK135451:4 AK145703:9 NM_008950:13 Z54219:13 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 9: | Line 9: | ||
|entrez_id=19184 | |entrez_id=19184 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=mSUG1 | + | |gene_alias=Rpt6{{!}}mSUG1 |
| − | |gene_description= | + | |gene_description=protease (prosome, macropain) 26S subunit, ATPase 5 |
|gene_id=19184 | |gene_id=19184 | ||
| − | |gene_name= | + | |gene_name=protease (prosome, macropain) 26S subunit, ATPase 5 |
|gene_source=MGI:105047 | |gene_source=MGI:105047 | ||
|gene_symbol=Psmc5 | |gene_symbol=Psmc5 | ||
| − | |gene_synonyms=mSUG1 | + | |gene_synonyms=Rpt6 mSUG1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:105047 | |hgnc_mgi_id=MGI:105047 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=106256156 | |start_of_center_position=106256156 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000021049.8 ENSMUST00000133131.1 AK012294 BC030840 AK010505 | + | |transcript_name=ENSMUST00000021049.8 ENSMUST00000133131.1 AK012294 KY499681 BC030840 AK010505 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99714.1 | |tss_id=mm_99714.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=P62196 Q8K1K2 | + | |uniprot_id=A0A1S6GWH1 P62196 Q8K1K2 |
}} | }} | ||
Revision as of 03:57, 22 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 106256156 |
|---|---|
| End of the center position in the TSS region: | 106256157 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000021049.8 ENSMUST00000133131.1 AK012294 KY499681 BC030840 AK010505 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENSMUST00000021049.8:0 ENSMUST00000133131.1:0 AK012294:0 KY499681:0 BC030840:0 AK010505:0 AK135451:4 AK145703:9 NM_008950:13 Z54219:13 |
TATA-Box annotation
| Distance to TSS: | -29 |
|---|---|
| Nearest PromoterID: | NM_008950 |
| Entrez ID: | 19184 |
| Nearest Unigene: | Mm.272361 |
| Nearest Refseq: | NM_008950 |
| Nearest Ensembl: | ENSMUSG00000020708 |
| Gene Name: | protease (prosome, macropain) 26S subunit, ATPase 5 |
| Gene Alias: | Rpt6|mSUG1 |
| Gene Description: | protease (prosome, macropain) 26S subunit, ATPase 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
