Difference between revisions of "TSS:Hg 100471.1"
From referenceTSS
| Line 30: | Line 30: | ||
|tata_box=-34(TCCTATAAAGGG,+,0.00),-34(TCCTATAAAGGG,-,0.00) | |tata_box=-34(TCCTATAAAGGG,+,0.00),-34(TCCTATAAAGGG,-,0.00) | ||
|transcript_name=ENST00000493581.1 ENST00000297991.6 ENST00000643650.1 NM_001318144 NM_004925 AK095363 AK292208 AK315760 AK303206 | |transcript_name=ENST00000493581.1 ENST00000297991.6 ENST00000643650.1 NM_001318144 NM_004925 AK095363 AK292208 AK315760 AK303206 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_100471.1 | |tss_id=hg_100471.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=A0A2R8YD22 Q92482 | |uniprot_id=A0A2R8YD22 Q92482 | ||
}} | }} | ||
Revision as of 17:44, 12 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 33447594 |
|---|---|
| End of the center position in the TSS region: | 33447595 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000493581.1 ENST00000297991.6 ENST00000643650.1 NM_001318144 NM_004925 AK095363 AK292208 AK315760 AK303206 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000493581.1:0 ENST00000297991.6:0 ENST00000643650.1:0 NM_001318144:0 NM_004925:0 AK095363:0 AK292208:0 AK315760:0 AK303206:0 ENST00000463983.5:5 AB001325:14 BC013566:20 ENST00000645858.1:34 AJ493597:34 KJ890695:56 CR541991:57 BT007199:57 CR542025:57 ENST00000473153.1:78 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_001318144 |
| Entrez ID: | 360 |
| Nearest Unigene: | Hs.234642 |
| Nearest Refseq: | NM_004925 |
| Nearest Ensembl: | ENSG00000165272 |
| Gene Name: | aquaporin 3 (Gill blood group) |
| Gene Alias: | AQP-3|GIL |
| Gene Description: | aquaporin 3 (Gill blood group) |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(TCCTATAAAGGG,+,0.00),-34(TCCTATAAAGGG,-,0.00) |
