Difference between revisions of "TSS:Hg 232130.1"
From referenceTSS
| Line 5: | Line 5: | ||
|distance=42 | |distance=42 | ||
|distance_to_tss=35 | |distance_to_tss=35 | ||
| − | |end= | + | |end=119080883 |
|end_of_center_position=119080874 | |end_of_center_position=119080874 | ||
|entrez_id=118987 | |entrez_id=118987 | ||
| Line 24: | Line 24: | ||
|num_trans=19 | |num_trans=19 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=119080864 |
|start_of_center_position=119080873 | |start_of_center_position=119080873 | ||
| − | |strand= | + | |strand=- |
|transcript_name=ENST00000541549.2 JX312508 | |transcript_name=ENST00000541549.2 JX312508 | ||
|tss_classification=yes | |tss_classification=yes | ||
Revision as of 08:30, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 119080873 |
|---|---|
| End of the center position in the TSS region: | 119080874 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000541549.2 JX312508 |
|---|---|
| Distance: | 42 |
| Num_trans: | 19 |
| All_trans: | ENST00000541549.2:42 JX312508:42 LP895213:43 ENST00000369144.8:48 NM_003750:48 AK309542:50 BC107776:55 BC064926:59 D50929:61 AK307610:65 U78311:76 BC033769:81 BC054342:84 U58046:91 BC114429:135 LF346032:187 MA581609:187 AB383762:189 AK302575:346 |
TATA-Box annotation
| Distance to TSS: | 35 |
|---|---|
| Nearest PromoterID: | NM_173791 |
| Entrez ID: | 118987 |
| Nearest Unigene: | Hs.501149 |
| Nearest Refseq: | NM_173791 |
| Nearest Ensembl: | ENSG00000165650 |
| Gene Name: | eukaryotic translation initiation factor 3 subunit A |
| Gene Alias: | PDZK8 |
| Gene Description: | PDZ domain containing 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
