Difference between revisions of "TSS:Hg 232196.1"
From referenceTSS
| Line 5: | Line 5: | ||
|distance=-37 | |distance=-37 | ||
|distance_to_tss=68 | |distance_to_tss=68 | ||
| − | |end= | + | |end=17229307 |
|end_of_center_position=17229302 | |end_of_center_position=17229302 | ||
|entrez_id=10557 | |entrez_id=10557 | ||
| Line 24: | Line 24: | ||
|num_trans=7 | |num_trans=7 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=17229296 |
|start_of_center_position=17229301 | |start_of_center_position=17229301 | ||
| − | |strand= | + | |strand=- |
|tata_box=-86(GAGTCTAAAAGA,-,0.00) | |tata_box=-86(GAGTCTAAAAGA,-,0.00) | ||
|transcript_name=LF346166 MA581743 | |transcript_name=LF346166 MA581743 | ||
Latest revision as of 08:31, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17229301 |
|---|---|
| End of the center position in the TSS region: | 17229302 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | LF346166 MA581743 |
|---|---|
| Distance: | -37 |
| Num_trans: | 7 |
| All_trans: | LF346166:-37 MA581743:-37 ENST00000661048.1:-113 LF346168:-184 MA581745:-184 LF346171:-385 MA581748:-385 |
TATA-Box annotation
| Distance to TSS: | 68 |
|---|---|
| Nearest PromoterID: | NM_001265601 |
| Entrez ID: | 10557 |
| Nearest Unigene: | Hs.94986 |
| Nearest Refseq: | NM_006414 |
| Nearest Ensembl: | ENSG00000152464 |
| Gene Name: | RPP38 |
| Gene Alias: | - |
| Gene Description: | ribonuclease P/MRP subunit p38 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -86(GAGTCTAAAAGA,-,0.00) |
