Difference between revisions of "TSS:Hg 232227.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance=-141 | |distance=-141 | ||
|distance_to_tss=57678 | |distance_to_tss=57678 | ||
| − | |end= | + | |end=27998721 |
|end_of_center_position=27998721 | |end_of_center_position=27998721 | ||
|entrez_id=22852 | |entrez_id=22852 | ||
| Line 25: | Line 25: | ||
|num_trans=8 | |num_trans=8 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=27998720 |
|start_of_center_position=27998720 | |start_of_center_position=27998720 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000673439.1 AK292521 | |transcript_name=ENST00000673439.1 AK292521 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_232227.1 | |tss_id=hg_232227.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=A0A140VKF7 | |uniprot_id=A0A140VKF7 | ||
}} | }} | ||
Revision as of 08:32, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 27998720 |
|---|---|
| End of the center position in the TSS region: | 27998721 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000673439.1 AK292521 |
|---|---|
| Distance: | -141 |
| Num_trans: | 8 |
| All_trans: | ENST00000673439.1:-141 AK292521:-141 NM_001290020:-176 HM005697:-327 AK001679:-327 BC085611:-329 ENST00000305242.10:-358 NM_018076:-358 |
TATA-Box annotation
| Distance to TSS: | 57678 |
|---|---|
| Nearest PromoterID: | NM_001256053 |
| Entrez ID: | 22852 |
| Nearest Unigene: | Hs.361041 |
| Nearest Refseq: | NM_014915 |
| Nearest Ensembl: | ENSG00000107890 |
| Gene Name: | outer dynein arm docking complex subunit 2 |
| Gene Alias: | THC2|bA145E8.1 |
| Gene Description: | ankyrin repeat domain 26 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
