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Difference between revisions of "TSS:Hg 232346.1"

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Line 7: Line 7:
 
|distance=5
 
|distance=5
 
|distance_to_tss=2
 
|distance_to_tss=2
|end=67885183
+
|end=68956221
 
|end_of_center_position=68956220
 
|end_of_center_position=68956220
 
|entrez_id=23411
 
|entrez_id=23411
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|num_trans=17
 
|num_trans=17
 
|species=human
 
|species=human
|start=67885182
+
|start=68956218
 
|start_of_center_position=68956219
 
|start_of_center_position=68956219
 
|strand=+
 
|strand=+

Revision as of 08:35, 14 July 2021

Basic information about the TSS


TSS ID:hg_232346.1
Species:human
Chr:chr10
TSS Classification:yes
Start:68956218
End:68956221
Strand:+
TSS Score:1
Start of the center position in the TSS region:68956219
End of the center position in the TSS region:68956220



Gene and protein annotation


Transcript_name:CU675917 AB527408 KJ892707
Distance:5
GeneID:9188
HGNC/MGI_ID:HGNC:2744
UniProt_ID:
Gene_name:DExD-box helicase 21
Gene_symbol:DDX21
Gene_synonyms:GURDB RH-II/GU
Gene_source:HGNC:2744



Transcript annotation


Transcript_name:CU675917 AB527408 KJ892707
Distance:5
Num_trans:17
All_trans:CU675917:5 AB527408:5 KJ892707:5 BC004182:-26 BC017228:-26 BC008071:-34 AK315585:-46 U41387:-47 ENST00000354185.9:-49 NM_004728:-49 BC009432:-49 BC104671:-91 LP895197:-91 ENST00000620315.1:219 NM_001256910:219 CR749598:219 BX648405:451



TATA-Box annotation


Distance to TSS:2
Nearest PromoterID:NM_001142498
Entrez ID:23411
Nearest Unigene:Hs.369779
Nearest Refseq:NM_012238
Nearest Ensembl:ENSG00000096717
Gene Name:DExD-box helicase 21
Gene Alias:SIR2|SIR2L1|SIR2alpha
Gene Description:sirtuin 1
Gene Type:protein-coding
CpG%:0.125
GC%:0.741294
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):